Detailed information NTG0428586

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: G7083_RS03385
• Genome accession: NZ_CP049913
• Coordinates: 724341..727733 (+)
• Length: 1130 a.a.
• NCBI ID: WP_166013588.1
• Uniprot ID: A0A6G8D2F3
• Organism: Vibrio sp. HDW18
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 719341..732733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G7083_RS03365 (G7083_03365)	erpA	719731..720072 (-)	342	WP_166013584.1	iron-sulfur cluster insertion protein ErpA	-
G7083_RS03370 (G7083_03370)	hemL	720351..721643 (+)	1293	WP_166013585.1	glutamate-1-semialdehyde 2,1-aminomutase	-
G7083_RS03375 (G7083_03375)	-	721951..723036 (+)	1086	WP_166013586.1	AI-2E family transporter	-
G7083_RS03380 (G7083_03380)	rsmC	723110..724132 (+)	1023	WP_166013587.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
G7083_RS03385 (G7083_03385)	chiS	724341..727733 (+)	3393	WP_166013588.1	response regulator	Regulator
G7083_RS03390 (G7083_03390)	-	728535..730205 (+)	1671	WP_166013589.1	ABC transporter substrate-binding protein	-
G7083_RS03395 (G7083_03395)	-	730391..731377 (+)	987	WP_166013590.1	ABC transporter permease	-
G7083_RS03400 (G7083_03400)	-	731380..732405 (+)	1026	WP_166013591.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127697.79 Da
• Isoelectric Point: 6.1097

>NTDB_id=428586 G7083_RS03385 WP_166013588.1 724341..727733(+) (chiS) [Vibrio sp. HDW18]
MFRFYRKQKFKRLQNTLMAAFLTLSIIPLTITALFFLRSHSQDLEQQSTSYLVSVRDTKQQQVIDYMLAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLDITIEGAREHAQQRYISGSGDQIKTSVLPQSSAYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDIDGNVVYSIYKHDNFGTNLLTGKDQANLLGQTFKRLEQMVSEQRQANEDFTPVVISDFEPQNGQQYAWLGAPI
IQQGYLHSYAMFRLPSNAITKLIADGNNHPTMQTILVGQDHRSRTLTTADIAVEKSKQVVDLALSGQRSVGTYTNTEGAN
VIAAYTPINLKSIHWALVVELPEKEAFAGIRQLEKLFVLAMLTAIVLVIIASHYLSNFITSPLLKLTWAAERVSAGDLDE
AMINTERKDEIGRLAVSFERMQRSIRDKITLIKAQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALVSGANGPLTAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSRSTRLVLELSHHLLGKKTLRI
INQVPDQPVWVSVDPQRLEQVLYNLIGNAIKYTSEGKIVISTTCMEDKVRVQVVDTGQGIPADQLEQIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMDGTLYVSSQPMVGTTFSFTLPLATQAEIEQADVIELSHFQAPDLIDPELPEQSSLPENEH
GPLLLVADDEPVNLRVLDSFLRLEGYRVHTVQDGHQVLEAVQAEKPELILLDIMMPGMSGYQVCEKLRQNYDHAELPIIM
LTALNQPDDRVRGFDAGANDYLCKPFNKQELAARIMAHLTASKAELRRIENAQLQQELKHRAMVEASLLETQGRLLEQLE
SAPEAILCVNEEHKVRFANEAAARLFRRTPEQLKRSNAEELIAPKYLSIDQEHYCGNIDVYVEDVRQHLSADVLRLPQGS
GLQAMYIFNVGGSINAARIYNLETAVEALSSYAFEGDKDKLQKLKELGGEFTRLADKATGEYQSKQDLMRAVLVEAMTSA
LNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPRTPRWRTVLNSLDYILEHCKESGPERAHIEMQRD
KLQKLLTSSD

Nucleotide

• Length: 3393 bp

>NTDB_id=428586 G7083_RS03385 WP_166013588.1 724341..727733(+) (chiS) [Vibrio sp. HDW18]
ATGTTTAGGTTCTATCGAAAACAAAAATTCAAGCGCCTACAGAATACGCTGATGGCCGCATTTCTGACACTGAGCATCAT
TCCACTGACGATTACCGCGCTGTTTTTCCTGCGTTCACACAGTCAAGATCTCGAACAGCAAAGTACCTCTTACCTTGTTT
CAGTACGAGATACTAAACAGCAACAAGTGATTGATTACATGTTGGCGAAAGAGTCGGAAGTGATGGGCTTTGTGCGCTCT
GAGCTCGCCTATGCCAGTGGCGGGCGTTTTTATGGTCTGGTCAATGCATTTCAACGCTTAGACATCACGATTGAAGGGGC
GCGTGAACATGCCCAGCAGCGCTATATCTCCGGCTCTGGCGATCAGATCAAAACCTCAGTACTACCACAGTCGAGCGCCT
ATGTAGGCAGTGAACGTTACCGCCTACTGCATAAGCGTTATCACTGGGCATATTTGGAGTTACTTAAACGTTCCGATTTT
GATGATATTTTGTTGGTCGATATTGACGGTAACGTGGTCTATTCAATCTACAAACACGATAACTTTGGCACCAATTTACT
CACTGGAAAAGACCAAGCCAACCTGCTTGGCCAAACCTTTAAACGCCTAGAACAAATGGTCAGTGAACAGCGCCAAGCCA
ATGAAGATTTCACTCCAGTGGTGATCTCTGATTTTGAACCACAAAATGGTCAACAGTACGCTTGGCTAGGTGCGCCGATC
ATCCAGCAAGGCTACCTGCACAGTTATGCGATGTTCCGCCTACCGAGTAATGCGATTACTAAATTGATTGCCGACGGCAA
TAACCACCCAACAATGCAAACTATCTTAGTCGGCCAAGATCATCGATCTCGAACCCTGACTACGGCGGATATTGCGGTTG
AAAAAAGTAAGCAAGTGGTCGATTTAGCCTTATCAGGACAACGCTCAGTTGGCACTTATACCAACACCGAGGGAGCAAAT
GTTATTGCCGCCTATACACCCATTAATCTGAAAAGTATTCACTGGGCACTCGTGGTTGAGTTGCCAGAAAAAGAAGCGTT
TGCTGGCATACGCCAGCTAGAAAAATTGTTTGTGTTAGCGATGCTGACCGCAATTGTATTAGTGATTATCGCATCACATT
ATCTGTCAAACTTCATTACTTCACCATTATTGAAACTGACCTGGGCGGCGGAACGCGTCTCGGCGGGCGATTTGGATGAA
GCGATGATCAACACCGAACGTAAAGATGAAATCGGTCGTTTAGCGGTCAGTTTTGAACGAATGCAACGTTCGATCCGTGA
CAAAATCACCCTGATCAAAGCACAAAATAAAGAGCTGGAAAGCAATCTGCTGATCATTCGTAAACAAAATGATGAGCTAC
AACTGGCTAACAAGCTGAAAGATGAATTTCTTGCCACCACCTCACACGAGTTGCGCACCCCGTTACATGGCATGATCGGC
ATTGCCGAGGCGTTAGTGTCTGGTGCCAATGGCCCATTAACGGCAGCACATAAATATCAGCTTGATATCATCATTAGTAG
TGGCCAGCGCTTAGCAACCCTAGTCGATGATCTGCTTGATTATCATAAAATGCGCTATGGCGCGTTAGACATTCAACGAT
GTGCCGTCGATTTGTCGAGATCCACTCGCTTAGTCCTTGAACTCTCGCATCATTTACTCGGCAAAAAAACCTTACGGATC
ATCAACCAAGTGCCAGATCAACCGGTCTGGGTTTCAGTCGACCCCCAACGCTTAGAGCAAGTACTGTACAACTTGATTGG
TAATGCAATTAAATACACTTCCGAAGGCAAAATTGTCATTTCGACCACCTGTATGGAAGATAAGGTACGTGTACAAGTGG
TAGATACCGGGCAAGGCATTCCGGCCGATCAACTTGAGCAGATTTTCGAACCACTGATCCAAGCCGGTCAAGACGCCAGT
CGCTACCGTCAAGGTGCAGGCTTAGGATTGTCGATCAGCCGCCAGTTGATCGAGCTAATGGATGGCACCTTGTATGTTAG
CAGTCAACCAATGGTCGGAACCACTTTCAGCTTTACCCTGCCATTAGCCACTCAAGCTGAGATCGAACAAGCGGATGTTA
TAGAACTGTCGCACTTCCAAGCCCCTGATCTGATTGACCCAGAGCTACCAGAGCAGAGTTCATTACCGGAAAATGAACAT
GGGCCACTGCTGCTGGTCGCTGATGATGAACCTGTCAATCTACGAGTATTAGACAGTTTTTTACGTCTTGAAGGTTATCG
AGTGCATACTGTCCAAGATGGACACCAAGTACTGGAGGCGGTACAAGCTGAAAAACCAGAGCTGATATTGCTCGACATCA
TGATGCCGGGGATGAGTGGCTATCAAGTCTGTGAAAAATTAAGACAAAACTACGATCATGCCGAATTGCCAATCATCATG
CTCACCGCACTCAACCAGCCTGATGATCGAGTACGTGGCTTTGATGCTGGTGCAAATGACTACTTATGTAAACCGTTTAA
TAAGCAAGAGCTCGCGGCGCGAATTATGGCTCATCTGACCGCCAGTAAGGCAGAGTTACGCCGGATTGAAAATGCACAGT
TACAACAAGAGCTCAAGCATCGAGCCATGGTCGAAGCTAGTTTACTGGAAACTCAAGGACGCTTATTGGAACAGCTAGAA
TCGGCTCCCGAAGCAATTTTATGTGTCAATGAAGAACATAAAGTACGTTTTGCCAATGAAGCGGCAGCACGCCTATTTAG
ACGCACGCCAGAGCAGCTTAAACGCTCCAATGCTGAAGAATTGATCGCCCCTAAATACCTCTCGATTGATCAAGAGCATT
ACTGCGGTAACATTGATGTTTATGTTGAAGATGTACGCCAACACCTCTCGGCCGATGTGCTGCGCTTACCACAAGGTTCC
GGCCTGCAAGCGATGTACATTTTTAATGTCGGTGGCAGTATCAACGCCGCGCGGATCTACAATTTAGAGACTGCAGTAGA
AGCGCTGTCTAGCTATGCCTTTGAGGGAGATAAAGACAAACTGCAAAAACTCAAAGAGCTCGGTGGCGAATTTACTCGGC
TCGCCGACAAAGCGACTGGTGAGTATCAATCGAAACAAGATTTGATGCGTGCAGTATTAGTCGAAGCGATGACCAGTGCG
CTCAATTATTGGGAGAGAGTTTCTGGGCAAAGCAAATTCACCTTTGCTGAACAAAGCGGTTTATGGCGTGTCTATCTTGA
CCGTAGTACCTTACAAACTCGCACCTTGGATAAATACCTACGGATCGAAACTCTACCAAGAACACCACGTTGGAGAACCG
TACTCAACTCGCTGGATTACATCTTAGAACACTGCAAAGAATCAGGTCCGGAACGGGCTCATATTGAAATGCAGCGCGAT
AAGTTACAAAAGCTGCTCACCAGCAGCGATTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS fold (PAS) (876-926)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-835)

• HAMP domain (HAMP) (375-427)

3D structure

• AlphaFold DB: A0A6G8D2F3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	91.046	99.823	0.909