Detailed information NTG0428585

Bioinformatically predicted

Overview

• Name: tfoS
• Type: Regulator
• Locus tag: G7083_RS02015
• Genome accession: NZ_CP049913
• Coordinates: 437926..441276 (-)
• Length: 1116 a.a.
• NCBI ID: WP_166013346.1
• Uniprot ID: -
• Organism: Vibrio sp. HDW18
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 432926..446276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G7083_RS01995 (G7083_01995)	-	433961..434392 (+)	432	WP_166013342.1	HIT domain-containing protein	-
G7083_RS02000 (G7083_02000)	-	434506..434736 (-)	231	WP_166013343.1	FeoC-like transcriptional regulator	-
G7083_RS02005 (G7083_02005)	feoB	434733..437006 (-)	2274	WP_166013344.1	Fe(2+) transporter permease subunit FeoB	-
G7083_RS02010 (G7083_02010)	-	437003..437233 (-)	231	WP_166013345.1	FeoA family protein	-
G7083_RS02015 (G7083_02015)	tfoS	437926..441276 (-)	3351	WP_166013346.1	AraC family transcriptional regulator	Regulator
G7083_RS02020 (G7083_02020)	znuA	441472..442356 (-)	885	WP_166013347.1	zinc ABC transporter substrate-binding protein ZnuA	-
G7083_RS02025 (G7083_02025)	znuC	442439..443227 (+)	789	WP_166013348.1	zinc ABC transporter ATP-binding protein ZnuC	-
G7083_RS02030 (G7083_02030)	znuB	443220..444002 (+)	783	WP_166013349.1	zinc ABC transporter permease subunit ZnuB	-
G7083_RS02035 (G7083_02035)	sucD	444128..445000 (-)	873	WP_166013350.1	succinate--CoA ligase subunit alpha	-
G7083_RS02040 (G7083_02040)	sucC	445000..446166 (-)	1167	WP_166013351.1	ADP-forming succinate--CoA ligase subunit beta	-

Sequence

Protein

• Length: 1116 a.a.
• Molecular weight: 126291.71 Da
• Isoelectric Point: 6.7167

>NTDB_id=428585 G7083_RS02015 WP_166013346.1 437926..441276(-) (tfoS) [Vibrio sp. HDW18]
MFRTFLYSCWLSLIIPSLGVANNNPMSVFYPLSMQEKGTVIVAKNLYLGDDGGIWIHDVHGKVMFFDGQNILPARGSVLP
EASKHIIYAKRALWTFEQHQLFRTYPGGEKELILTLPPGTQINQIGVSNGMIWLNDSANFYSYDIDNARLDTFSLHQLYS
LNSASQVVINDAQFFASKWALATNVGVYLSMPQGFSHITDSGKSAIQKLYFSERRRELLVGSAHGASIIDIEHSRLLSKP
IGAAEVLSIAETDTEYWIGTENGLYLYRLDSGKVTQPETYRNDDYALLGKKIYSMVNDLQGGMWIATDKGMFYYSLLAQQ
LTRYPAQSLSRDGSRVQISKIKSFNMQGDYLAITQQGLYRFNFTGEFRKNLIYPGQVNDFVIAGDDVWIATEQGLVSYNL
AQRQINAPPLPMSLLHNSVKLLTVDGDGRLWGASHEQLWSYLPSEQTETNYGMEWMVKGLSPAKITVLAAVEQGIVIGTE
HGAYTLFDKQIRFDFSSHRYGEIVQVVEDKTGHIWLVGAYGVFQWQNHQPPAIAVELVEENIQPRCIAQSAQGMWLISSQ
GISLYQHQGQLSKHFAAPYGLISNEFILGACAVGEVLDSSSLIMGSQFGVVQANTQALAVSNLPNIQIMFSQVSVNHQPK
LLGYQPDGLLQIAYDDAISFQFGALSSLRNPLLEYKLNDEREWQRFDWAQLNFDRLLPGEYRLKVRSANPTHQDQTPAIF
DFEVLPPWYLSPAAIIGYVMLLGGGLSLMLSWRTRVIVEANRQLKNQVELKTSQLHHQTKIVQSSNQQLRKLLQVHHNLF
GKVFESIDPALRHLSSYAKVRGWNEFELPFNKVKQELTQLHFMHRGETPESQRHDLNLLMESALKSWQEEYNKAEIQLVY
RGEVCLIEIRQFNLDILFNVVFTDAIRRLAKQQQLSIQLEQRDSQGVLIFSDHGSAIDNFSAIPISFNGACTYSVQELVQ
HSGGELRILRLNDCNVLELAWPLAASPITRSFKVQALSIADHIVLDDGEKKWLRKVNQLIEHNYNDSDFTTSRAAQLLFV
SERSLQRRFKAATGKTFKESLNQMRLEKACQSLLCGARIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQEGR

Nucleotide

• Length: 3351 bp

>NTDB_id=428585 G7083_RS02015 WP_166013346.1 437926..441276(-) (tfoS) [Vibrio sp. HDW18]
GTGTTTCGCACATTTTTATACAGCTGCTGGCTGAGTCTTATTATTCCGTCACTAGGAGTGGCCAACAATAACCCGATGTC
GGTTTTCTACCCTTTATCTATGCAGGAAAAAGGGACTGTGATAGTGGCGAAAAATCTGTATCTCGGCGACGACGGCGGAA
TATGGATCCATGATGTCCATGGCAAGGTGATGTTTTTTGATGGACAGAATATTTTGCCAGCGCGTGGTTCGGTATTACCC
GAAGCCTCAAAGCATATTATTTATGCCAAGCGCGCGTTGTGGACCTTTGAGCAACATCAACTGTTTCGCACCTATCCGGG
AGGAGAGAAAGAGCTCATCTTAACCCTGCCCCCAGGTACTCAAATTAATCAGATCGGCGTGTCAAATGGCATGATTTGGT
TGAATGATAGCGCGAACTTTTATAGTTATGATATTGATAATGCAAGGCTTGATACTTTTTCTTTGCACCAGCTTTATTCG
TTGAACAGCGCCAGCCAAGTAGTGATTAATGATGCGCAGTTTTTCGCCTCAAAATGGGCTTTGGCGACCAATGTCGGTGT
TTATTTGTCGATGCCACAAGGCTTTAGCCATATCACGGACTCTGGTAAATCGGCGATCCAAAAGCTCTATTTTTCTGAAC
GGCGGCGCGAGCTATTGGTTGGTTCTGCGCATGGCGCATCGATCATCGATATTGAGCACTCGCGCTTATTGTCCAAACCA
ATCGGTGCTGCGGAAGTGTTGTCAATCGCTGAAACTGACACTGAGTATTGGATTGGTACTGAAAATGGTCTGTATCTTTA
CAGACTAGATAGCGGAAAAGTCACTCAACCTGAAACATATCGCAACGATGATTATGCACTATTGGGTAAGAAAATTTACT
CAATGGTTAATGATTTACAAGGTGGTATGTGGATCGCGACTGACAAAGGTATGTTTTATTATTCATTATTGGCTCAGCAG
TTGACTCGATATCCTGCGCAAAGCTTATCCCGTGATGGTAGTCGGGTCCAAATCAGTAAAATTAAGTCGTTCAACATGCA
GGGAGATTATTTAGCGATAACCCAACAAGGCCTATATCGATTTAATTTTACTGGCGAATTTCGTAAAAACTTGATTTATC
CCGGTCAAGTCAATGATTTCGTTATTGCTGGAGATGACGTCTGGATTGCTACTGAGCAAGGGCTGGTGAGCTACAATCTT
GCACAGCGCCAGATCAACGCTCCGCCATTGCCGATGTCATTGCTGCACAATTCGGTTAAACTGCTCACCGTCGATGGTGA
TGGCCGGCTTTGGGGAGCCAGCCATGAGCAGCTTTGGTCTTATTTGCCGAGCGAACAAACCGAGACCAATTATGGGATGG
AGTGGATGGTGAAAGGATTATCACCCGCGAAGATCACCGTACTTGCCGCCGTTGAACAAGGCATAGTGATTGGTACCGAA
CATGGTGCTTACACTTTGTTTGATAAACAGATCCGCTTTGATTTCTCCAGTCATCGCTATGGTGAAATAGTACAAGTTGT
TGAAGATAAGACTGGTCATATTTGGCTGGTCGGGGCTTATGGTGTATTTCAGTGGCAGAACCATCAACCGCCCGCAATTG
CAGTGGAGTTAGTTGAAGAGAATATTCAGCCGCGCTGTATTGCTCAGTCAGCACAGGGGATGTGGCTCATTTCATCGCAG
GGGATCAGTCTCTATCAGCACCAAGGTCAACTCAGTAAACACTTTGCTGCGCCTTATGGCTTGATCAGCAATGAGTTTAT
ATTAGGTGCTTGTGCGGTCGGTGAAGTGTTGGATAGCTCCTCTCTTATCATGGGATCGCAATTTGGTGTGGTGCAAGCTA
ATACCCAAGCACTGGCGGTCTCTAATTTGCCCAATATTCAGATCATGTTTAGTCAAGTGAGTGTGAACCACCAGCCGAAA
CTATTGGGTTATCAGCCGGATGGTCTGTTGCAAATTGCCTATGATGATGCGATTAGTTTTCAGTTTGGGGCCTTGTCATC
GTTACGTAATCCATTGTTGGAATATAAGCTCAATGATGAGCGAGAATGGCAGCGGTTTGACTGGGCGCAGCTCAATTTTG
ATCGATTACTGCCCGGCGAATATCGTTTAAAAGTGCGTAGCGCAAATCCAACCCACCAAGATCAAACCCCAGCTATATTC
GATTTTGAGGTTCTCCCTCCTTGGTATCTAAGCCCTGCCGCTATTATTGGTTATGTGATGCTATTGGGTGGTGGTTTGTC
TTTAATGCTAAGTTGGCGAACTCGAGTGATTGTTGAGGCGAATCGACAGCTAAAAAACCAAGTCGAGCTTAAAACCAGTC
AATTGCATCATCAAACTAAAATTGTACAGAGCAGTAATCAGCAATTACGTAAGTTACTGCAAGTACATCACAATTTGTTT
GGCAAAGTATTTGAGAGTATTGATCCCGCATTACGCCATCTTTCCTCTTATGCCAAAGTGCGTGGGTGGAATGAGTTCGA
GTTGCCGTTTAATAAAGTTAAACAAGAATTAACCCAATTGCATTTCATGCATCGAGGCGAAACCCCAGAGAGTCAACGCC
ACGATTTAAATTTATTGATGGAATCGGCCTTAAAAAGTTGGCAGGAAGAATACAACAAAGCAGAAATCCAGTTGGTGTAC
CGTGGTGAAGTCTGTCTTATCGAAATTCGCCAATTTAACCTCGATATACTGTTTAATGTCGTGTTCACCGATGCGATTCG
ACGGCTTGCTAAACAGCAACAGTTATCTATCCAACTTGAGCAGAGAGATTCACAAGGCGTGCTGATTTTTTCAGATCACG
GATCAGCGATTGATAACTTCAGTGCCATTCCCATCTCATTCAACGGTGCGTGTACTTATTCGGTGCAAGAGTTAGTACAG
CATAGTGGTGGGGAATTACGGATTTTACGCCTCAACGATTGTAATGTTCTCGAGTTGGCGTGGCCGTTGGCAGCATCGCC
TATAACTCGGTCATTTAAGGTGCAAGCGTTATCTATCGCTGATCACATTGTGCTTGATGATGGGGAAAAAAAGTGGCTGC
GTAAAGTCAATCAGCTGATCGAGCACAATTATAATGATTCGGATTTTACCACCTCTAGAGCGGCACAATTACTGTTTGTT
TCCGAGCGTAGTTTGCAGCGCCGCTTTAAAGCGGCAACCGGTAAAACATTTAAAGAATCGCTCAATCAAATGCGTTTAGA
GAAGGCGTGCCAGAGTTTGTTGTGTGGTGCCAGAATTGCTCAAGTTGCCTTTGATTGTGGATTTAATGACCCTTCTTATT
TTAGTCAGCGTTTTAAGCACCATTTTGGCTTATCACCGAGCCAATTTATCGAGGATCAAGAGGGTAGATAA

Domains

Predicted by InterproScan.

• Helix-turn-helix domain (HTH_18) (1035-1110)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tfoS	Vibrio cholerae O1 biovar El Tor strain E7946	66.906	99.91	0.668