Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G7047_RS28380 Genome accession   NZ_CP049910
Coordinates   6247416..6247817 (+) Length   133 a.a.
NCBI ID   WP_166311629.1    Uniprot ID   A0A6G8CX85
Organism   Diaphorobacter sp. HDW4A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6242416..6252817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7047_RS28355 (G7047_28365) - 6243024..6244082 (+) 1059 WP_166311624.1 iron ABC transporter permease -
  G7047_RS28360 (G7047_28370) - 6244079..6244855 (+) 777 WP_166311625.1 ABC transporter ATP-binding protein -
  G7047_RS28365 (G7047_28375) hemL 6244859..6246163 (-) 1305 WP_166311626.1 glutamate-1-semialdehyde 2,1-aminomutase -
  G7047_RS28370 (G7047_28380) - 6246147..6247097 (-) 951 WP_166311627.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  G7047_RS28375 (G7047_28385) - 6247192..6247365 (+) 174 WP_166311628.1 rubredoxin -
  G7047_RS28380 (G7047_28390) pilG 6247416..6247817 (+) 402 WP_166311629.1 PleD family two-component system response regulator Regulator
  G7047_RS28385 (G7047_28395) - 6247818..6248183 (+) 366 WP_166311630.1 PleD family two-component system response regulator -
  G7047_RS28390 (G7047_28400) - 6248222..6248749 (+) 528 WP_166311631.1 chemotaxis protein CheW -
  G7047_RS28395 (G7047_28405) - 6248770..6251040 (+) 2271 WP_166311632.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14721.94 Da        Isoelectric Point: 6.9240

>NTDB_id=428580 G7047_RS28380 WP_166311629.1 6247416..6247817(+) (pilG) [Diaphorobacter sp. HDW4A]
MTTGGNPTFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKINDFNPQLIFCDILMPKLDGYQTCAIIKRNAKY
SDTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGIVDQGAK

Nucleotide


Download         Length: 402 bp        

>NTDB_id=428580 G7047_RS28380 WP_166311629.1 6247416..6247817(+) (pilG) [Diaphorobacter sp. HDW4A]
TTGACTACAGGTGGAAATCCAACATTCAAGGTGCTGGTTGTCGATGACAGCAACACCATCCGCCGGAGTGCGGAAATTTT
TCTCAAGCAGGGCGGGCACGAGGTGCTGCTTGCAGACGATGGTTTTGACGCACTGTCCAAAATCAACGACTTCAATCCTC
AGCTGATCTTCTGCGACATTTTGATGCCCAAGCTCGATGGGTATCAGACCTGCGCAATCATCAAGCGCAACGCCAAATAT
TCAGACACGCCGGTCGTGATGTTGTCCTCCAAGGACGGGGTCTTCGACAAGGCGCGCGGCCGCATGGTCGGCTGTCAGGA
ATATCTCACCAAACCGTTTACGAAAGACCAGTTGCTGCAAGCGGTGCAGCAATTTGGCATTGTGGATCAAGGAGCTAAGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(11-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8CX85

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.207

87.218

0.534