Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   V753_RS06985 Genome accession   NZ_CP049904
Coordinates   1345986..1346450 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain GB03     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1340986..1351450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V753_RS06965 (V753_06945) - 1341467..1343287 (+) 1821 WP_029325882.1 PAS domain-containing protein -
  V753_RS06970 (V753_06950) - 1343268..1344481 (-) 1214 Protein_1314 aminotransferase A -
  V753_RS06975 (V753_06955) - 1344682..1344843 (-) 162 WP_007409608.1 hypothetical protein -
  V753_RS06980 (V753_06960) cheV 1345032..1345943 (+) 912 WP_007611092.1 chemotaxis protein CheV -
  V753_RS06985 (V753_06965) kre 1345986..1346450 (-) 465 WP_003154622.1 YkyB family protein Regulator
  V753_RS06990 (V753_06970) - 1346573..1347865 (-) 1293 WP_007611093.1 MFS transporter -
  V753_RS06995 (V753_06975) - 1347941..1348435 (-) 495 WP_087920795.1 L,D-transpeptidase family protein -
  V753_RS07000 (V753_06980) - 1348510..1349373 (-) 864 WP_007611096.1 metallophosphoesterase -
  V753_RS07005 (V753_06985) fadH 1349517..1350281 (+) 765 WP_029325883.1 2,4-dienoyl-CoA reductase -
  V753_RS07010 - 1350395..1350941 (+) 547 Protein_1322 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=428490 V753_RS06985 WP_003154622.1 1345986..1346450(-) (kre) [Bacillus velezensis strain GB03]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=428490 V753_RS06985 WP_003154622.1 1345986..1346450(-) (kre) [Bacillus velezensis strain GB03]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAATGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929