Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V753_RS05645 Genome accession   NZ_CP049904
Coordinates   1099885..1100076 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain GB03     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1094885..1105076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V753_RS05615 (V753_05605) argF 1095737..1096708 (+) 972 WP_007610570.1 ornithine carbamoyltransferase -
  V753_RS05620 (V753_05610) - 1096784..1096963 (+) 180 WP_003155070.1 YjzC family protein -
  V753_RS05625 (V753_05615) - 1097000..1097185 (-) 186 WP_003155069.1 YjzD family protein -
  V753_RS05630 (V753_05620) - 1097446..1098180 (+) 735 WP_007610576.1 hypothetical protein -
  V753_RS05635 (V753_05625) - 1098263..1098829 (+) 567 WP_007610577.1 hypothetical protein -
  V753_RS05640 (V753_05630) med 1098919..1099872 (+) 954 WP_007610578.1 BMP family ABC transporter substrate-binding protein Regulator
  V753_RS05645 (V753_05635) comZ 1099885..1100076 (+) 192 WP_003155061.1 ComZ family protein Regulator
  V753_RS05650 (V753_05640) - 1100105..1100323 (-) 219 WP_007610579.1 hypothetical protein -
  V753_RS05655 (V753_05645) - 1100491..1101429 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  V753_RS05660 (V753_05650) fabF 1101452..1102690 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  V753_RS05665 (V753_05655) - 1102773..1103558 (+) 786 WP_029325951.1 DUF2268 domain-containing protein -
  V753_RS05670 (V753_05660) - 1103732..1104718 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=428483 V753_RS05645 WP_003155061.1 1099885..1100076(+) (comZ) [Bacillus velezensis strain GB03]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=428483 V753_RS05645 WP_003155061.1 1099885..1100076(+) (comZ) [Bacillus velezensis strain GB03]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794