Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   V753_RS05640 Genome accession   NZ_CP049904
Coordinates   1098919..1099872 (+) Length   317 a.a.
NCBI ID   WP_007610578.1    Uniprot ID   -
Organism   Bacillus velezensis strain GB03     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1093919..1104872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V753_RS05615 (V753_05605) argF 1095737..1096708 (+) 972 WP_007610570.1 ornithine carbamoyltransferase -
  V753_RS05620 (V753_05610) - 1096784..1096963 (+) 180 WP_003155070.1 YjzC family protein -
  V753_RS05625 (V753_05615) - 1097000..1097185 (-) 186 WP_003155069.1 YjzD family protein -
  V753_RS05630 (V753_05620) - 1097446..1098180 (+) 735 WP_007610576.1 hypothetical protein -
  V753_RS05635 (V753_05625) - 1098263..1098829 (+) 567 WP_007610577.1 hypothetical protein -
  V753_RS05640 (V753_05630) med 1098919..1099872 (+) 954 WP_007610578.1 BMP family ABC transporter substrate-binding protein Regulator
  V753_RS05645 (V753_05635) comZ 1099885..1100076 (+) 192 WP_003155061.1 ComZ family protein Regulator
  V753_RS05650 (V753_05640) - 1100105..1100323 (-) 219 WP_007610579.1 hypothetical protein -
  V753_RS05655 (V753_05645) - 1100491..1101429 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  V753_RS05660 (V753_05650) fabF 1101452..1102690 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  V753_RS05665 (V753_05655) - 1102773..1103558 (+) 786 WP_029325951.1 DUF2268 domain-containing protein -
  V753_RS05670 (V753_05660) - 1103732..1104718 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35357.02 Da        Isoelectric Point: 4.6686

>NTDB_id=428482 V753_RS05640 WP_007610578.1 1098919..1099872(+) (med) [Bacillus velezensis strain GB03]
MITRLVMIFSLLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=428482 V753_RS05640 WP_007610578.1 1098919..1099872(+) (med) [Bacillus velezensis strain GB03]
TTGATCACCAGGCTTGTCATGATCTTTTCTCTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCCATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGACACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTTGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTATACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATACAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782