Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IF700_RS00525 Genome accession   NZ_CP062388
Coordinates   93079..93897 (+) Length   272 a.a.
NCBI ID   WP_240017472.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_044     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 88079..98897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF700_RS00500 (IF700_00495) - 88698..89228 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  IF700_RS00505 (IF700_00500) yfkAB 89488..90639 (-) 1152 WP_001089621.1 radical SAM/CxCxxxxC motif protein YfkAB -
  IF700_RS00510 (IF700_00505) - 90863..91024 (+) 162 WP_001005407.1 SE1561 family protein -
  IF700_RS00515 (IF700_00510) - 91155..91670 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  IF700_RS00520 (IF700_00515) sgtB 92010..92819 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  IF700_RS00525 (IF700_00520) recX 93079..93897 (+) 819 WP_240017472.1 recombination regulator RecX Regulator
  IF700_RS00530 (IF700_00525) - 93875..94189 (+) 315 WP_000435806.1 YfhH family protein -
  IF700_RS00535 (IF700_00530) - 94204..95721 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  IF700_RS00540 (IF700_00535) - 95730..96566 (+) 837 WP_000886462.1 membrane protein -
  IF700_RS00545 (IF700_00540) - 96827..97804 (-) 978 WP_000379098.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32258.16 Da        Isoelectric Point: 6.7487

>NTDB_id=428425 IF700_RS00525 WP_240017472.1 93079..93897(+) (recX) [Staphylococcus aureus strain NAS_AN_044]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYRKQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=428425 IF700_RS00525 WP_240017472.1 93079..93897(+) (recX) [Staphylococcus aureus strain NAS_AN_044]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATTCAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAAAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993