Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G7045_RS11035 Genome accession   NZ_CP049885
Coordinates   2399106..2399498 (-) Length   130 a.a.
NCBI ID   WP_166159684.1    Uniprot ID   A0A6G8AIC7
Organism   Acidovorax sp. HDW3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2394106..2404498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7045_RS11020 (G7045_11025) - 2395903..2398164 (-) 2262 WP_166159681.1 methyl-accepting chemotaxis protein -
  G7045_RS11025 (G7045_11030) - 2398192..2398716 (-) 525 WP_166159682.1 chemotaxis protein CheW -
  G7045_RS11030 (G7045_11035) - 2398735..2399100 (-) 366 WP_166159683.1 PleD family two-component system response regulator -
  G7045_RS11035 (G7045_11040) pilG 2399106..2399498 (-) 393 WP_166159684.1 PleD family two-component system response regulator Regulator
  G7045_RS11040 (G7045_11045) - 2399864..2400706 (+) 843 WP_370521630.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  G7045_RS11045 (G7045_11050) hemL 2400719..2402029 (+) 1311 WP_166159686.1 glutamate-1-semialdehyde 2,1-aminomutase -
  G7045_RS11050 (G7045_11055) purH 2402129..2403733 (-) 1605 WP_205737188.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  G7045_RS11055 (G7045_11060) - 2403803..2404042 (-) 240 WP_166159687.1 Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14470.68 Da        Isoelectric Point: 7.7463

>NTDB_id=428330 G7045_RS11035 WP_166159684.1 2399106..2399498(-) (pilG) [Acidovorax sp. HDW3]
MSTTGASVKVLVVDDSNTIRRSAEIFLKQGGHEVMLADDGFDALAKINDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
NTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNPHKE

Nucleotide


Download         Length: 393 bp        

>NTDB_id=428330 G7045_RS11035 WP_166159684.1 2399106..2399498(-) (pilG) [Acidovorax sp. HDW3]
TTGTCTACAACCGGCGCTTCCGTCAAGGTTCTCGTGGTGGATGACAGCAATACCATCCGTCGCAGTGCCGAGATTTTTCT
CAAGCAGGGTGGTCACGAGGTCATGCTGGCCGACGATGGCTTTGATGCCCTGGCCAAGATCAATGACTATCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTCGATGGCTACCAGACCTGCGCCATCATCAAGCGCAATGCGCGCTTCGCC
AATACGCCTGTGGTCATGCTCTCGTCCAAAGACGGGGTGTTCGACAAGGCACGTGGCCGCATGGTCGGCTGCCAAGAGTA
TTTGACCAAACCGTTTACCAAAGACCAGCTGCTGCAAGCCGTGCAGCAGTTTGGCAACCCCCATAAGGAGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8AIC7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

59.483

89.231

0.531