Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G7069_RS05900 Genome accession   NZ_CP049864
Coordinates   1251874..1252272 (+) Length   132 a.a.
NCBI ID   WP_166295260.1    Uniprot ID   A0A6G7YWQ3
Organism   Lysobacter sp. HDW10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1246874..1257272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7069_RS05880 (G7069_05880) - 1247183..1249135 (+) 1953 WP_166295252.1 ATP-dependent DNA helicase -
  G7069_RS05885 (G7069_05885) tsaB 1249132..1249845 (+) 714 WP_166295254.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  G7069_RS05890 (G7069_05890) - 1249846..1250730 (-) 885 WP_166295256.1 energy transducer TonB -
  G7069_RS05895 (G7069_05895) gshB 1250727..1251680 (-) 954 WP_166295258.1 glutathione synthase -
  G7069_RS05900 (G7069_05900) pilG 1251874..1252272 (+) 399 WP_166295260.1 twitching motility response regulator PilG Regulator
  G7069_RS05905 (G7069_05905) - 1252285..1252650 (+) 366 WP_166295262.1 response regulator -
  G7069_RS05910 (G7069_05910) - 1252661..1253191 (+) 531 WP_166297596.1 chemotaxis protein CheW -
  G7069_RS05915 (G7069_05915) - 1253243..1255252 (+) 2010 WP_166295264.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14612.90 Da        Isoelectric Point: 7.2446

>NTDB_id=428245 G7069_RS05900 WP_166295260.1 1251874..1252272(+) (pilG) [Lysobacter sp. HDW10]
MESTDISGNLSGLKVMVIDDSKTIRRTAETLLKREGCDVVTASDGFEALAKIVEQHPHIIFVDVMMPRLDGYQTCALIKN
NQVFKSTPVIMLSSRDGLFDKAKGRIVGSEQYLTKPFTREELLGAIRSHVTA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=428245 G7069_RS05900 WP_166295260.1 1251874..1252272(+) (pilG) [Lysobacter sp. HDW10]
ATGGAATCAACCGACATTTCCGGCAATTTGAGCGGGCTGAAGGTGATGGTGATCGACGACTCCAAAACCATTCGTCGTAC
AGCAGAAACTCTGCTGAAACGCGAAGGGTGTGACGTCGTGACGGCGAGTGACGGGTTCGAGGCCTTGGCCAAGATCGTCG
AGCAACATCCGCACATCATTTTCGTCGACGTGATGATGCCGCGCCTTGACGGTTATCAAACCTGCGCGCTCATTAAGAAC
AATCAGGTCTTCAAATCGACGCCGGTGATCATGCTGTCGTCCAGAGACGGCTTGTTTGACAAAGCCAAGGGCCGAATTGT
CGGCTCGGAACAATATCTCACCAAGCCATTCACGCGTGAAGAATTGCTGGGTGCCATTAGATCTCATGTGACCGCTTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G7YWQ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.984

93.182

0.689