Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IF703_RS00560 Genome accession   NZ_CP062382
Coordinates   101856..102674 (+) Length   272 a.a.
NCBI ID   WP_240024673.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_068     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 96856..107674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF703_RS00540 (IF703_00535) - 97977..98138 (+) 162 WP_001005407.1 SE1561 family protein -
  IF703_RS00545 (IF703_00540) - 98268..98783 (+) 516 WP_000163287.1 type 1 glutamine amidotransferase domain-containing protein -
  IF703_RS00550 (IF703_00545) - 98926..100493 (+) 1568 WP_103225775.1 IS3-like element ISSau2 family transposase -
  IF703_RS00555 (IF703_00550) sgtB 100786..101595 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  IF703_RS00560 (IF703_00555) recX 101856..102674 (+) 819 WP_240024673.1 recombination regulator RecX Regulator
  IF703_RS00565 (IF703_00560) - 102652..102966 (+) 315 WP_000435806.1 YfhH family protein -
  IF703_RS00570 (IF703_00565) - 102981..104498 (+) 1518 WP_042908027.1 ABC transporter ATP-binding protein -
  IF703_RS00575 (IF703_00570) - 104507..105343 (+) 837 WP_000886457.1 membrane protein -
  IF703_RS00580 (IF703_00575) - 105604..106581 (-) 978 WP_047213591.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32255.11 Da        Isoelectric Point: 5.6338

>NTDB_id=428161 IF703_RS00560 WP_240024673.1 101856..102674(+) (recX) [Staphylococcus aureus strain NAS_AN_068]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDYYRIGLNKAIQYLSYKKRAEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=428161 IF703_RS00560 WP_240024673.1 101856..102674(+) (recX) [Staphylococcus aureus strain NAS_AN_068]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATTATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAGCTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAAAGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989