Detailed information NTG0428050

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G8765_RS05575
• Genome accession: NZ_CP049828
• Coordinates: 1242862..1243920 (-)
• Length: 352 a.a.
• NCBI ID: WP_176381889.1
• Uniprot ID: -
• Organism: Janthinobacterium lividum strain EIF2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1237862..1248920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8765_RS05545 (G8765_05550)	-	1238545..1238892 (+)	348	WP_176381885.1	antibiotic biosynthesis monooxygenase	-
G8765_RS05550 (G8765_05555)	-	1238889..1239341 (-)	453	WP_176381887.1	hypothetical protein	-
G8765_RS05555 (G8765_05560)	-	1239521..1239787 (+)	267	WP_034784922.1	hypothetical protein	-
G8765_RS05560 (G8765_05565)	rpoH	1239878..1240777 (-)	900	WP_170846504.1	RNA polymerase sigma factor RpoH	-
G8765_RS05565 (G8765_05570)	ftsX	1241193..1242113 (-)	921	WP_092612941.1	permease-like cell division protein FtsX	-
G8765_RS05570 (G8765_05575)	-	1242110..1242853 (-)	744	WP_034784934.1	ATP-binding cassette domain-containing protein	-
G8765_RS05575 (G8765_05580)	pilA	1242862..1243920 (-)	1059	WP_176381889.1	signal recognition particle-docking protein FtsY	Machinery gene
G8765_RS05580 (G8765_05585)	-	1244085..1245065 (-)	981	WP_230523160.1	MerR family transcriptional regulator	-
G8765_RS05585 (G8765_05590)	-	1245231..1246541 (+)	1311	WP_176381891.1	FAD-dependent oxidoreductase	-
G8765_RS05590 (G8765_05595)	-	1246531..1247328 (+)	798	WP_176381893.1	DUF1365 domain-containing protein	-
G8765_RS05595 (G8765_05600)	-	1247403..1248566 (+)	1164	WP_176385977.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37378.67 Da
• Isoelectric Point: 6.8948

>NTDB_id=428050 G8765_RS05575 WP_176381889.1 1242862..1243920(-) (pilA) [Janthinobacterium lividum strain EIF2]
MFSFFKKKPIAPEAAPAEPLVLPAAPPPAPQPAATPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGA
KIDDALYEELEAALLMSDAGIDATEFLLTELKKRVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRHKPLVMMISGV
NGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVD
TAGRLPTQLHLMEELKKIKRVIGKGMDGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIAR
VRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1059 bp

>NTDB_id=428050 G8765_RS05575 WP_176381889.1 1242862..1243920(-) (pilA) [Janthinobacterium lividum strain EIF2]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCTGCACCAGCCGAGCCTCTCGTCCTTCCCGCCGCCCCGCC
GCCTGCCCCGCAGCCTGCCGCTACGCCCCTGAGCGGTGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCG
AGAAAAAATCGTGGATGACACGCCTCAAGGCAGGCCTGTCGAAAACCTCGAACACCCTGTCCGTGCTGTTTGTCGGCGCG
AAGATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCACGGAATTCCT
GCTGACGGAACTGAAGAAGAGGGTCAAGGAAGACAAGCTGCTCGACGCGGCCGCCGTCAAGGCCGCCCTGAAAGTGCTGC
TGATCGACCTGCTCTCGCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTG
AATGGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCCGC
GGGCGACACCTTCCGCGCCGCCGCGCGCGAACAGCTGATGGTCTGGGGCGAACGCAACAACGTCACCGTGATTTCGCAGG
AATCGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAAGCGCGCGGCATCGACGTGGTCATGGTCGAC
ACGGCAGGCCGCCTGCCGACGCAGTTGCACCTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGA
TGGCGCACCGCATGAAACCTTGCTCGTCATCGACGGCAACACGGGCCAGAACGCCCTCACGCAAGTGAAGGCCTTCGACG
ATGCCCTGCAGTTGAGCGGCCTGGTGATCACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGCTGGCTGCAATTGCCCGC
GTACGTCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGT
CGAAGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (71-131)

• SRP54-type protein, GTPase domain (SRP54) (153-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	57.012	93.182	0.531