Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   G8E09_RS17275 Genome accession   NZ_CP049806
Coordinates   3649014..3651242 (+) Length   742 a.a.
NCBI ID   WP_039763451.1    Uniprot ID   A0A6H0FY43
Organism   Acinetobacter pittii strain A1254     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3644014..3656242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8E09_RS17250 (G8E09_17240) lnt 3644465..3646024 (+) 1560 WP_167564171.1 apolipoprotein N-acyltransferase -
  G8E09_RS17255 (G8E09_17245) csaA 3646026..3646364 (-) 339 WP_005804172.1 tRNA-binding protein -
  G8E09_RS17260 (G8E09_17250) - 3646509..3646853 (-) 345 WP_005804170.1 hypothetical protein -
  G8E09_RS17265 (G8E09_17255) gspG 3647121..3647636 (-) 516 WP_017402575.1 type II secretion system major pseudopilin GspG -
  G8E09_RS17270 (G8E09_17260) gspF 3647660..3648865 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  G8E09_RS17275 (G8E09_17265) priA 3649014..3651242 (+) 2229 WP_039763451.1 primosomal protein N' Machinery gene
  G8E09_RS17280 (G8E09_17270) kefB 3651319..3653163 (+) 1845 WP_167564172.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  G8E09_RS17285 (G8E09_17275) hslO 3653327..3654202 (+) 876 WP_167564173.1 Hsp33 family molecular chaperone HslO -
  G8E09_RS17290 (G8E09_17280) - 3654340..3654951 (+) 612 WP_017481968.1 LysE family translocator -
  G8E09_RS17295 (G8E09_17285) cbpA 3655086..3656042 (+) 957 WP_068930426.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84025.76 Da        Isoelectric Point: 8.4592

>NTDB_id=427998 G8E09_RS17275 WP_039763451.1 3649014..3651242(+) (priA) [Acinetobacter pittii strain A1254]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=427998 G8E09_RS17275 WP_039763451.1 3649014..3651242(+) (priA) [Acinetobacter pittii strain A1254]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCGCAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCCCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCGCACGACTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAACAAGTACTGGTGTTAGTCCCAGAAATTGGTTT
AACCCCTCAAACGATTTCTCGTTTTAAATCGCGTTTTAACTGTGATATTGCTCTATTACACTCTGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCTCAGACGGGCAAAGCATCTATTATTTTAGGAACACGCTCAGCCATTTATACGCCG
CTGCCACGTTTAGGTCTCATCATTTTAGATGAAGAGCATGACCTGTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCATTGTACCGAGGCCACTTGCAAAATTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATAGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAATCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATAGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGGTGGCAAGCAA
ATTGTCCACATTGTGATGCACATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTACCCGATCACTGCCCTGAATGCCAGCAAAAAAGCCTAAAAACCCTAGGTGCTGGAACAGCTAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGACCGTATTCATCAAAACAAACCAACAATTTTGCTGGGCACTCAAATGTTGGCAAAAGGCCATCATTTTCCA
CACGTCACTTTAGTTGCCATTTTAGATATTGATGCTGGGTTACTTAGTGTCGACATCCGTGCGCCAGAGCGTACGGCGCA
GCTGATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACATAAAGGCCATGTTTATTTACAAACCCTAAGACCAGATC
ACCCTTTACTCACCACGCTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAATCTAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGAAATTGTTGATATTTGGGGTCCGATTCCAGCACCGATGGAACGTAAAGCTG
GGCGCTACCGCGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGGCAATGGTGGTCACAA
TTGGTTCATGCGCCGCGCCAGCATCAACTCAGATTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0FY43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.248

100

0.982