Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   G8E09_RS03375 Genome accession   NZ_CP049806
Coordinates   689275..693780 (+) Length   1501 a.a.
NCBI ID   WP_167563082.1    Uniprot ID   -
Organism   Acinetobacter pittii strain A1254     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 684275..698780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8E09_RS03350 (G8E09_03350) - 684718..685356 (-) 639 WP_017385895.1 hypothetical protein -
  G8E09_RS03355 (G8E09_03355) pilG 685641..686024 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  G8E09_RS03360 (G8E09_03360) pilH 686047..686409 (+) 363 WP_002116220.1 response regulator -
  G8E09_RS03365 (G8E09_03365) pilI 686470..687006 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  G8E09_RS03370 (G8E09_03370) pilJ 687049..689127 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  G8E09_RS03375 (G8E09_03375) chpA 689275..693780 (+) 4506 WP_167563082.1 hybrid sensor histidine kinase/response regulator Regulator
  G8E09_RS03380 (G8E09_03380) - 693780..694247 (+) 468 WP_214286947.1 hypothetical protein -
  G8E09_RS03385 (G8E09_03385) - 694555..695436 (+) 882 WP_167563083.1 alpha/beta fold hydrolase -
  G8E09_RS03390 (G8E09_03390) dapE 695572..696708 (-) 1137 WP_167563084.1 succinyl-diaminopimelate desuccinylase -
  G8E09_RS03395 (G8E09_03395) - 696835..696978 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  G8E09_RS03400 (G8E09_03400) - 697102..697983 (-) 882 WP_167563085.1 DUF1853 family protein -
  G8E09_RS03405 (G8E09_03405) - 698087..698455 (+) 369 WP_017385889.1 YbaN family protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171150.54 Da        Isoelectric Point: 4.4230

>NTDB_id=427981 G8E09_RS03375 WP_167563082.1 689275..693780(+) (chpA) [Acinetobacter pittii strain A1254]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFIEEIEENFVELQSLIHEWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKDHTLDFRPLILLGQQLQQQQSVEPALDELLLLS
DILTAETQTGLEANDLEPESTEVLTISTQEVAIETEQTVAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFEASTKVEHLFKILLQEELSSHSEEISLLRGYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFVPLFNA
EVEQTANDPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLVASSALIDFIRLVQDDLADRLQIVRQQHLDYAASHTIQALKS
AGQVFDSQIKEGKTEPETYVIPELNFEVLQQEEINNTALSLSELTSGSEQIAESSNQLIEQTELQVLYADHDHTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAKKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQELFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLIDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SLNETIYRKRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=427981 G8E09_RS03375 WP_167563082.1 689275..693780(+) (chpA) [Acinetobacter pittii strain A1254]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTATCGAAGAAATTGAAGAAAATTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATA
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCTGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATCAGAGCCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAGATCATACCTTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAACAACAGCAAAGTGTAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAGCGAATGACTTAGAACCAGAATCAACTGAAGTTTTAACTATTTC
GACTCAAGAAGTTGCTATAGAAACTGAACAGACTGTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTTTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGAAGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCACTCTGAAGAAATTTCATTACTCCGTGGTTATCGTCAGTTTATTCGAAATAGCTTAG
ATCTATTGGCTGCACATTGCTCTACTGAGCAATTGGAATCTGACCTACAAAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCCTCCACATGGTTTAGTGTCTCAGTTATTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAATCGCAGGCAATGATTGGTTTGTATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGACTTATTGCAATCAGATTATATTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCGTTAGCTGCTGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGATGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCATTAGAAACTCATCAAGACGTTTTTGTACCATTGTTTAATGCT
GAAGTTGAACAAACAGCGAATGATCCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAGTTTATTTCATCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGGTAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTGCAAATAGTACGTCAACAGCATCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAGT
GCAGGTCAGGTATTTGATTCTCAGATTAAAGAGGGCAAAACAGAACCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGAGATAAATAATACGGCGTTAAGCCTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTGCTGAGT
CCAGTAATCAACTTATTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACGATCATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACATTTATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCACTTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGTTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCAAAACACGGTATTGAGAAC
TCGCGTTATACGGAATTTGATCCGTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTGTTGCCTCGTCTCCAAAGA
ATTGTGAGACAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTTTTTGTTAATAATACTGAAGGTGAGCTAGACCGGAC
AATGCTAGAACGTTTGGTTACACCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCGCAAC
GTGAACAAGCTAAAAAACCAGAAACGGGACGTATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGATGATGGGCAAGGTATTGATATTGAGAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAGCAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCTGATCAAGTCACTCAGATCTCAGGTC
GTGGCGTAGGGCTGGATGTAGTGCAAAGTGATATTAAGGCCTTAGGTGGCCATGTGAGTGTCGACTCTGTATATGGGCAG
GGAACTGTCTTTACCATACGCGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCACTGGCTCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAG
AGCTCTTTGAATTTGAAAATAAGCGTTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAATTGACCAACT
GATTGGCTCACGCGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCGCCGACATAAA
TCGCTTAATGAAACTATTTATAGAAAACGCGAGTCTGACGAGCGACGTCTTATCATGATTGTAGATGACTCGGTAACTGT
ACGTAAGGTGACGTCTCGCTTACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTTGATGCGATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCACGAATGGATGGCTTTGAGGTACTTAATCTC
GTTCGACATCATGATCTACATCAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGAGAACGAGC
ATTTACTTTAGGTGTGAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATTTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

80.199

100

0.804