Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   G8E09_RS02455 Genome accession   NZ_CP049806
Coordinates   501237..502121 (+) Length   294 a.a.
NCBI ID   WP_167563010.1    Uniprot ID   A0A6H0FQR6
Organism   Acinetobacter pittii strain A1254     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 496237..507121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8E09_RS02430 (G8E09_02430) - 496550..497797 (-) 1248 WP_167563008.1 YihY family inner membrane protein -
  G8E09_RS02435 (G8E09_02435) wrbA 498159..498761 (+) 603 WP_214286942.1 NAD(P)H:quinone oxidoreductase -
  G8E09_RS02440 (G8E09_02440) xpt 498813..499388 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  G8E09_RS02445 (G8E09_02445) - 499461..500174 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  G8E09_RS02450 (G8E09_02450) - 500333..501004 (-) 672 WP_002119526.1 hypothetical protein -
  G8E09_RS02455 (G8E09_02455) tonB2 501237..502121 (+) 885 WP_167563010.1 energy transducer TonB Machinery gene
  G8E09_RS02460 (G8E09_02460) ybeY 502173..502649 (-) 477 WP_017481656.1 rRNA maturation RNase YbeY -
  G8E09_RS02465 (G8E09_02465) phoL 502659..503747 (-) 1089 WP_002119513.1 PhoH family protein -
  G8E09_RS02470 (G8E09_02470) miaB 503785..505236 (-) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33579.14 Da        Isoelectric Point: 7.2039

>NTDB_id=427979 G8E09_RS02455 WP_167563010.1 501237..502121(+) (tonB2) [Acinetobacter pittii strain A1254]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSSSEQSTKEIAISIRPSNEPVVQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=427979 G8E09_RS02455 WP_167563010.1 501237..502121(+) (tonB2) [Acinetobacter pittii strain A1254]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTGTTGCTCATTCACTTTGCTATGCCTAGCTCGTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTGTTCAGGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCAGCAGCAAAGAGAACTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAAGCAAAAGCTGCGATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGTCAACAAGATTTCAGCCGTCAGCAAAAAATCAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAGCAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGCTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATAGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0FQR6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

89.116

100

0.891