Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   G8E00_RS01770 Genome accession   NZ_CP049801
Coordinates   396526..398748 (-) Length   740 a.a.
NCBI ID   WP_166221580.1    Uniprot ID   A0A6G8RSL2
Organism   Acinetobacter shaoyimingii strain 323-1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 391526..403748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8E00_RS01750 (G8E00_01750) - 391819..392157 (-) 339 WP_166008683.1 chaperone modulator CbpM -
  G8E00_RS01755 (G8E00_01755) - 392170..393150 (-) 981 WP_166221576.1 DnaJ C-terminal domain-containing protein -
  G8E00_RS01760 (G8E00_01760) hslO 393612..394487 (-) 876 WP_166008681.1 Hsp33 family molecular chaperone HslO -
  G8E00_RS01765 (G8E00_01765) - 394538..396418 (-) 1881 WP_166221578.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  G8E00_RS01770 (G8E00_01770) priA 396526..398748 (-) 2223 WP_166221580.1 primosomal protein N' Machinery gene
  G8E00_RS01775 (G8E00_01775) gspF 398901..400106 (+) 1206 WP_166221589.1 type II secretion system inner membrane protein GspF -
  G8E00_RS01780 (G8E00_01780) gspG 400159..400614 (+) 456 WP_166008677.1 type II secretion system major pseudopilin GspG -
  G8E00_RS01785 (G8E00_01785) - 400893..401225 (+) 333 WP_166008676.1 hypothetical protein -
  G8E00_RS01790 (G8E00_01790) lnt 401353..402912 (-) 1560 WP_166221591.1 apolipoprotein N-acyltransferase -
  G8E00_RS01795 (G8E00_01795) - 402909..403748 (-) 840 WP_166008674.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84289.54 Da        Isoelectric Point: 8.5108

>NTDB_id=427901 G8E00_RS01770 WP_166221580.1 396526..398748(-) (priA) [Acinetobacter shaoyimingii strain 323-1]
MPNILNTAPELYRIRVAVPVHLYDCFDYKVTEDQYRQIEVGARVAVSFGRQHVVGIVTEKLQSDAPIDSSFQLKFITEIL
DDQTILNEAVLKLCHWSAQYYQFPIGEVMHAAIPTLLRQGKPYNLLARTWKVLDLNADDKFKRSEKQQDAYKVLKLHPHG
TAETILNLSGIETATLKAIEKKGIIRCELEPQNFQPEPVQLAQMPLTPNEDQQKAIQSMVKAKNKYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIVLMHSGLNDTKRLQAWQHAQTGKATIILGTRSAIFTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIVLGSATPSIDSFYLADQGKLTHLKLTQRAGGALMPKMHL
IDLKIAKKQQGISQNLIDEIKKRLDKKEQVLIFLNRRGYAPVLICESCAWQANCPHCDAHFTLHKKPYEHLHCHHCGTIN
RLPDACPQCHQQTLKPIGMGTAKVEETLQELFPEHKILRVDRDSTSRVGSWQKIYDQIHTSEPMILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEMKGEVYLQTLRPDHPLLNTLITKDYRAFAKDTLADRQIALL
PPCRYAVMIRCESRSQDENQTFLTNMTQKLREHAGNLIDIWGPIPAPMERKAGRYQAHVVLLSTERAKMHFYVREWWQQI
LHFKPSNMKITIDVDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=427901 G8E00_RS01770 WP_166221580.1 396526..398748(-) (priA) [Acinetobacter shaoyimingii strain 323-1]
ATGCCAAATATTTTAAATACTGCTCCAGAACTTTATCGCATTCGCGTCGCTGTACCTGTACATCTTTATGACTGCTTTGA
TTATAAAGTTACTGAAGATCAATATCGTCAAATTGAAGTCGGTGCACGCGTTGCTGTGTCCTTTGGTCGTCAACATGTGG
TGGGTATTGTGACTGAAAAGCTACAGTCTGATGCGCCAATTGACTCAAGTTTTCAACTCAAATTCATTACTGAAATTTTG
GATGATCAAACAATTTTAAATGAGGCTGTTTTAAAACTTTGCCATTGGTCTGCACAGTATTATCAATTCCCCATAGGGGA
AGTGATGCATGCTGCGATTCCTACCCTGCTTCGACAAGGCAAGCCATATAACTTGCTTGCTCGAACATGGAAAGTCTTAG
ATTTAAATGCAGATGACAAATTCAAACGTTCTGAGAAGCAACAAGATGCTTATAAAGTTTTAAAATTACATCCGCATGGA
ACAGCAGAAACCATCTTAAATTTAAGCGGAATCGAAACTGCGACACTCAAAGCAATCGAAAAAAAAGGCATTATTCGTTG
TGAATTAGAACCGCAAAATTTTCAGCCTGAACCTGTTCAATTGGCGCAGATGCCTTTAACACCCAATGAAGATCAGCAAA
AAGCCATACAAAGCATGGTAAAAGCTAAAAATAAATATCAAGCTTTTTTACTCGATGGATTGACTGGTAGTGGTAAAACT
GAAGTGTATTTGCAGGTCATGCACGAGGTGTTAAAACAAGGTAAACAAGTCCTTGTTCTCGTTCCTGAAATTGGATTAAC
ACCACAAACCATTAGTCGCTTCCAATCTCGTTTTCATTGCAATATTGTGCTTATGCATTCAGGTTTGAATGACACCAAAC
GCTTACAAGCTTGGCAACATGCACAAACAGGCAAAGCCACCATTATTCTAGGTACGCGTTCTGCCATTTTTACCCCTATG
CCAAATCTTGGTCTGATCATTTTAGATGAAGAACATGATTTATCATTTAAGCAACAAGAAGGCTTCCGTTATCACGCACG
AGATGTGGCTTTGTATCGTGCACATTTAGAAAATTGCCCGATTGTTTTAGGCTCAGCAACACCAAGCATTGATTCATTCT
ATTTAGCCGATCAGGGAAAATTGACCCACCTCAAATTGACACAACGTGCAGGTGGGGCATTGATGCCAAAAATGCATTTG
ATCGATTTGAAAATTGCAAAAAAACAGCAAGGCATCAGTCAAAACCTCATCGATGAAATCAAAAAACGTTTAGATAAAAA
AGAACAAGTGCTGATTTTTTTAAATCGACGTGGTTATGCACCCGTTTTAATTTGTGAAAGCTGTGCTTGGCAAGCCAATT
GCCCCCATTGTGATGCCCATTTTACCTTACATAAAAAACCCTATGAGCATTTGCACTGTCATCACTGTGGCACAATCAAT
CGCCTGCCTGATGCATGCCCACAATGTCATCAACAAACATTAAAGCCAATCGGGATGGGCACAGCGAAAGTAGAAGAAAC
CCTTCAAGAACTTTTTCCTGAACATAAAATCTTACGCGTCGACCGTGATTCCACCAGTCGTGTCGGAAGCTGGCAAAAAA
TTTATGATCAGATCCATACGAGTGAACCCATGATTTTACTGGGTACACAAATGCTGGCCAAAGGACATCATTTCCCCTAT
GTCACTTTAGTGGCAATCTTGGATATTGATTCTGGTTTACTGAGCGTAGACTTCCGTGCCACAGAACGAACAGCCCAGTT
AATTATTCAAGTGGCTGGGCGTGCTGGACGTGGAGAAATGAAAGGCGAAGTTTATCTACAGACTTTACGCCCCGACCATC
CGCTTTTAAATACGCTTATTACTAAAGATTATCGTGCCTTTGCTAAAGATACGCTGGCTGATCGACAAATTGCTCTCCTT
CCACCTTGTCGTTATGCAGTCATGATTCGTTGTGAATCACGCAGTCAGGATGAAAATCAAACTTTTTTAACCAACATGAC
CCAAAAACTGCGTGAACATGCGGGCAATCTGATTGATATTTGGGGTCCCATTCCAGCACCCATGGAACGCAAAGCAGGAC
GATACCAAGCTCATGTGGTATTACTTTCGACGGAGCGTGCCAAAATGCATTTTTATGTACGCGAATGGTGGCAACAAATT
TTGCATTTCAAACCATCAAACATGAAAATTACCATTGATGTCGATCCACAAGAACTGAGTTGA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(207-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8RSL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.721

98.919

0.709