Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | HJ37_RS13805 | Genome accession | NC_016445 |
| Coordinates | 3002745..3003263 (+) | Length | 172 a.a. |
| NCBI ID | WP_001130227.1 | Uniprot ID | - |
| Organism | Vibrio cholerae O1 str. 2010EL-1786 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2997745..3008263
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HJ37_RS13795 (Vch1786_I2867) | - | 2998155..3001010 (+) | 2856 | WP_001233047.1 | pitrilysin family protein | - |
| HJ37_RS13800 (Vch1786_I2869) | gshA | 3001122..3002696 (+) | 1575 | WP_000032608.1 | glutamate--cysteine ligase | - |
| HJ37_RS13805 (Vch1786_I2870) | luxS | 3002745..3003263 (+) | 519 | WP_001130227.1 | S-ribosylhomocysteine lyase | Regulator |
| HJ37_RS13810 (Vch1786_I2871) | - | 3003333..3004613 (-) | 1281 | WP_000340990.1 | HlyC/CorC family transporter | - |
| HJ37_RS13815 (Vch1786_I2872) | - | 3004696..3005490 (-) | 795 | WP_000369278.1 | inner membrane protein YpjD | - |
| HJ37_RS13820 (Vch1786_I2873) | ffh | 3005703..3007088 (+) | 1386 | WP_000462720.1 | signal recognition particle protein | - |
| HJ37_RS13825 (Vch1786_I2874) | rpsP | 3007324..3007572 (+) | 249 | WP_000256449.1 | 30S ribosomal protein S16 | - |
| HJ37_RS13830 (Vch1786_I2875) | rimM | 3007600..3008154 (+) | 555 | WP_000061906.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19080.90 Da Isoelectric Point: 5.2199
>NTDB_id=42781 HJ37_RS13805 WP_001130227.1 3002745..3003263(+) (luxS) [Vibrio cholerae O1 str. 2010EL-1786]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
Nucleotide
Download Length: 519 bp
>NTDB_id=42781 HJ37_RS13805 WP_001130227.1 3002745..3003263(+) (luxS) [Vibrio cholerae O1 str. 2010EL-1786]
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
100 |
100 |
1 |