Detailed information NTG0042766

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HJ37_RS10445
• Genome accession: NC_016445
• Coordinates: 2314196..2315203 (-)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae O1 str. 2010EL-1786
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2309196..2320203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HJ37_RS10420 (Vch1786_I2165)	rraA	2309771..2310286 (-)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-
HJ37_RS10425 (Vch1786_I2166)	-	2310361..2311278 (-)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HJ37_RS10430 (Vch1786_I2167)	hslU	2311382..2312713 (-)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
HJ37_RS10435 (Vch1786_I2168)	hslV	2312779..2313336 (-)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
HJ37_RS10440 (Vch1786_I2169)	-	2313473..2314024 (-)	552	WP_001884022.1	SPOR domain-containing protein	-
HJ37_RS10445 (Vch1786_I2170)	cytR	2314196..2315203 (-)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
HJ37_RS10450 (Vch1786_I2171)	priA	2315509..2317713 (-)	2205	WP_001247858.1	primosomal protein N'	-
HJ37_RS10455 (Vch1786_I2172)	rpmE	2317968..2318186 (+)	219	WP_000643446.1	50S ribosomal protein L31	-
HJ37_RS10460 (Vch1786_I2174)	-	2318494..2319771 (+)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
HJ37_RS10465 (Vch1786_I2175)	metJ	2319882..2320199 (-)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=42766 HJ37_RS10445 WP_000224452.1 2314196..2315203(-) (cytR) [Vibrio cholerae O1 str. 2010EL-1786]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=42766 HJ37_RS10445 WP_000224452.1 2314196..2315203(-) (cytR) [Vibrio cholerae O1 str. 2010EL-1786]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904