Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   G8O30_RS07510 Genome accession   NZ_CP049742
Coordinates   1469438..1471138 (-) Length   566 a.a.
NCBI ID   WP_239674354.1    Uniprot ID   A0A7S8CB98
Organism   Mangrovibacillus cuniculi strain R1DC41     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1464438..1476138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8O30_RS07490 (G8O30_07475) - 1464812..1466392 (-) 1581 WP_239674350.1 FapA family protein -
  G8O30_RS07495 (G8O30_07480) - 1466585..1466785 (+) 201 WP_239674351.1 hypothetical protein -
  G8O30_RS07500 (G8O30_07485) spo0A 1466852..1467652 (-) 801 WP_239674352.1 sporulation transcription factor Spo0A -
  G8O30_RS07505 (G8O30_07490) spoIVB 1468030..1469298 (-) 1269 WP_239674353.1 SpoIVB peptidase -
  G8O30_RS07510 (G8O30_07495) recN 1469438..1471138 (-) 1701 WP_239674354.1 DNA repair protein RecN Machinery gene
  G8O30_RS07515 (G8O30_07500) ahrC 1471157..1471606 (-) 450 WP_239674518.1 transcriptional regulator AhrC/ArgR -
  G8O30_RS07520 (G8O30_07505) - 1471769..1472611 (-) 843 WP_239674355.1 TlyA family RNA methyltransferase -
  G8O30_RS07525 (G8O30_07510) dxs 1472626..1474505 (-) 1880 Protein_1480 1-deoxy-D-xylulose-5-phosphate synthase -
  G8O30_RS07530 (G8O30_07515) - 1474711..1475589 (-) 879 WP_239674356.1 polyprenyl synthetase family protein -
  G8O30_RS07535 (G8O30_07520) xseB 1475592..1475804 (-) 213 WP_239674357.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 566 a.a.        Molecular weight: 63701.02 Da        Isoelectric Point: 4.8892

>NTDB_id=427598 G8O30_RS07510 WP_239674354.1 1469438..1471138(-) (recN) [Mangrovibacillus cuniculi strain R1DC41]
MLTELTIKNFAIITELSVPFQEGLTVLTGETGAGKSIIIDAVHLLVGGRGSTDFIRHGEDKAELEGLFFVDRSNHPVYEK
AQEFGLTIEDGMIVFRRDIYKNGKSVCRVNGKLVTIATLREVGATLMDIHGQHETQSLLQEHQHISLLDHFAKDSLEMTM
TQYQELYRSYKQVKKRLDEISSNEQQIAHRIDLLSFQVNEIQQAALKTGEDEELQEERKRLSNFEKLYESLQNSYEMLKG
EQKGLDWISIASREVEFAASLDSEMESVSENVQNSYYALEDAASTIRNMLDGLEFQPERLNEIEHRLNELNQLKRKYGST
IAEVIQYGEEKSVELDELLNREGTVNDLEKQLSSIEEDLKIEAKALSEERTAAAVTLTEQIHDQLQQLYMEKARFHVNIA
TNEGAYTSSGIDEVTFLISTNQGEPLKPLAKIASGGELSRIMLALKTIFSRHQGVTSIIFDEVDTGVSGRVAQSIAEKIY
QVAVHSQVLCISHLPQVAALADTHLFISKRTENGRTFSSVLPLSETDKIDEIGRMISGIEVTELTRKHAKELVTLAKTVK
KQPNKV

Nucleotide


Download         Length: 1701 bp        

>NTDB_id=427598 G8O30_RS07510 WP_239674354.1 1469438..1471138(-) (recN) [Mangrovibacillus cuniculi strain R1DC41]
GTGTTAACAGAATTAACAATTAAAAACTTTGCAATTATTACGGAACTCTCCGTACCTTTCCAAGAGGGTCTAACAGTCTT
AACAGGTGAAACAGGTGCCGGGAAATCAATCATTATTGATGCTGTTCATCTTTTGGTAGGTGGAAGAGGTTCTACTGATT
TTATTCGTCACGGAGAAGATAAAGCGGAATTAGAAGGTTTGTTCTTCGTTGATAGATCAAATCACCCAGTATATGAAAAG
GCACAAGAGTTCGGTTTAACCATTGAAGATGGCATGATCGTCTTTAGACGTGACATTTATAAAAATGGAAAAAGTGTATG
TAGAGTCAACGGGAAGCTTGTGACGATAGCCACTTTGAGAGAAGTTGGCGCAACGTTAATGGACATACATGGTCAACATG
AAACACAGAGTTTATTACAGGAACATCAACATATTTCTTTGTTAGATCATTTTGCTAAAGATTCGTTAGAAATGACAATG
ACGCAATACCAAGAATTATACCGTTCTTATAAACAGGTGAAAAAAAGGTTAGATGAGATTTCCTCAAACGAACAACAAAT
TGCACACCGTATTGATTTACTTTCTTTCCAAGTGAATGAGATTCAACAAGCAGCACTAAAGACTGGGGAAGATGAAGAGT
TACAAGAGGAACGAAAAAGGTTGTCTAATTTCGAGAAACTATATGAATCATTACAAAATAGTTATGAAATGCTAAAAGGT
GAACAAAAAGGACTCGATTGGATCTCTATCGCATCCCGTGAAGTAGAGTTTGCAGCTAGCTTAGACTCCGAAATGGAGTC
TGTGTCTGAGAATGTTCAGAACAGTTACTATGCATTGGAAGATGCAGCCTCTACTATTCGAAACATGTTAGATGGATTAG
AGTTTCAACCCGAACGGTTAAATGAAATAGAACACAGATTAAATGAATTGAATCAACTAAAACGAAAATATGGATCAACA
ATAGCGGAAGTGATTCAATATGGGGAGGAAAAGTCTGTTGAACTAGATGAATTGCTAAATCGAGAAGGTACGGTGAATGA
TCTAGAAAAACAACTTAGCTCCATAGAAGAAGATTTAAAAATTGAAGCAAAAGCATTATCGGAAGAACGTACAGCAGCTG
CTGTAACGTTAACAGAGCAAATCCATGATCAGTTACAACAATTGTACATGGAAAAAGCTCGTTTTCATGTAAATATCGCA
ACCAATGAAGGTGCGTACACGTCTTCTGGTATAGATGAAGTAACCTTTTTGATCTCCACTAACCAGGGAGAGCCTTTAAA
GCCACTAGCTAAAATTGCCTCAGGTGGAGAGTTATCTAGAATCATGCTTGCATTAAAAACCATCTTCTCTCGTCACCAAG
GTGTTACTTCCATTATTTTTGATGAAGTAGATACTGGCGTTTCAGGAAGAGTTGCTCAATCTATTGCGGAAAAAATTTAT
CAGGTAGCTGTTCACTCGCAAGTGTTATGTATATCCCATTTACCACAAGTTGCTGCATTAGCAGATACACACTTATTTAT
TTCCAAACGTACCGAGAATGGCCGGACATTCTCTTCAGTTCTTCCGTTATCAGAAACGGATAAAATTGATGAAATAGGTC
GTATGATTTCTGGTATAGAAGTGACAGAATTAACAAGAAAGCATGCGAAAGAACTTGTTACACTTGCGAAAACAGTAAAA
AAACAACCAAATAAAGTATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S8CB98

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

57.317

100

0.581