Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   G8O30_RS03475 Genome accession   NZ_CP049742
Coordinates   680004..681821 (+) Length   605 a.a.
NCBI ID   WP_239673602.1    Uniprot ID   A0A7S8C9W1
Organism   Mangrovibacillus cuniculi strain R1DC41     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 675004..686821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8O30_RS03455 (G8O30_03440) spxA 675755..676150 (+) 396 WP_239673598.1 transcriptional regulator SpxA -
  G8O30_RS03460 (G8O30_03445) mecA 676412..677068 (+) 657 WP_239673599.1 adaptor protein MecA -
  G8O30_RS03465 (G8O30_03450) cls 677141..678652 (+) 1512 WP_239673600.1 cardiolipin synthase -
  G8O30_RS03470 (G8O30_03455) - 678734..679903 (+) 1170 WP_239673601.1 competence protein CoiA -
  G8O30_RS03475 (G8O30_03460) pepF 680004..681821 (+) 1818 WP_239673602.1 oligoendopeptidase F Regulator
  G8O30_RS03480 (G8O30_03465) - 682351..683181 (-) 831 WP_239673603.1 ClpXP adapter SpxH family protein -
  G8O30_RS03485 (G8O30_03470) - 683171..683560 (-) 390 WP_239673604.1 globin -
  G8O30_RS16085 (G8O30_03475) - 683910..684530 (-) 621 WP_275576516.1 lytic transglycosylase domain-containing protein -
  G8O30_RS03495 (G8O30_03480) - 684562..685143 (-) 582 WP_239673605.1 CYTH domain-containing protein -
  G8O30_RS03500 (G8O30_03485) - 685270..685638 (+) 369 WP_239673606.1 hypothetical protein -
  G8O30_RS03505 (G8O30_03490) - 685665..686285 (+) 621 WP_239673607.1 GTP pyrophosphokinase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69339.91 Da        Isoelectric Point: 4.6940

>NTDB_id=427590 G8O30_RS03475 WP_239673602.1 680004..681821(+) (pepF) [Mangrovibacillus cuniculi strain R1DC41]
MTTKTSSLPTRSEVEENLTWRLEDIFSSDEDWNEEFKQVQTLLKDAEGYKGTIKNGAAALLEVLTYRDNVMQRLGKLYTY
AHMRYDQDTGNSFYQGLDDRIKTLYTQAASGLSYLVPEILELSDEELSSYLSEEPKLELYRHALEEIAKERPHVLSAEQE
ALLAQASEVMAASSNTFGMLNNADLTFPVVKDENGQEVEITHGRYIRFLESENRQVREDAFKGVYGTYGSYKNTFASTLA
GTVKKDNFNARVRNYPSARAAALANNHIPETVYDQLVDTVNKNLPLLHRYVALRKKVLGLEELHMYDLFTPLVKDVKMEV
SYDEAKELMLESMKPLGEEYVSIVEDGLNNRWVDVYENKGKRSGAYSSGTYGTNPYILMNWQDNVNNLFTLTHEFGHSVH
SYYTRKSQPYPYGNYSIFVAEVASTCNEALLNDHLLKTTTDPKKRLYLLNHFLEGFRGTVFRQTMFAEFELLIHQKAQEG
EALTAELLTKEYYALNEKYFGKDNMVIDEEIGLEWARIPHFYYNFYVYQYATGYSAATALSKQILEEGQPAVDRYVEFLK
AGSSDYPIEVLKKAGVDMTTSKPIEDACKVFEEKLAEMEQLLEEL

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=427590 G8O30_RS03475 WP_239673602.1 680004..681821(+) (pepF) [Mangrovibacillus cuniculi strain R1DC41]
ATGACAACAAAAACATCTTCCTTACCTACTCGTTCAGAAGTAGAAGAGAACTTAACATGGAGACTAGAAGATATTTTTTC
ATCCGATGAAGATTGGAATGAAGAGTTTAAACAAGTTCAAACATTGTTAAAAGATGCGGAAGGATATAAAGGTACAATTA
AAAACGGAGCTGCAGCTTTATTAGAAGTTTTAACATATCGTGACAATGTCATGCAACGACTAGGCAAATTATATACATAT
GCTCACATGAGATACGATCAAGATACAGGTAATTCTTTCTATCAAGGTTTGGATGACCGTATCAAGACACTTTACACGCA
AGCAGCAAGTGGATTATCTTATCTTGTACCGGAGATTTTAGAGTTATCTGATGAGGAACTTTCTTCTTATTTATCAGAAG
AACCTAAATTAGAACTATATCGCCATGCTTTAGAAGAAATCGCGAAAGAACGTCCTCATGTTCTATCTGCAGAGCAGGAA
GCATTACTTGCACAAGCTTCAGAGGTTATGGCAGCGTCTAGTAACACATTTGGTATGTTAAATAATGCAGACCTAACCTT
CCCAGTAGTAAAAGACGAAAATGGTCAAGAAGTAGAGATTACACATGGTAGGTATATTAGATTCCTAGAATCTGAAAATC
GCCAAGTTCGAGAAGATGCTTTCAAAGGGGTCTATGGAACGTATGGTTCATATAAAAATACTTTTGCTAGTACATTAGCA
GGTACAGTGAAAAAGGATAACTTTAATGCTAGAGTTAGAAATTATCCTTCTGCACGTGCAGCTGCTTTAGCAAATAACCA
TATTCCTGAGACGGTATACGATCAATTAGTAGACACAGTAAACAAAAACTTACCTCTATTGCATCGTTATGTTGCTCTAC
GTAAGAAGGTCCTAGGTTTAGAAGAACTTCACATGTATGATCTATTTACACCACTTGTAAAAGATGTGAAAATGGAAGTT
TCATATGATGAAGCAAAAGAGTTAATGTTAGAGTCCATGAAACCTCTTGGAGAAGAATATGTATCTATCGTTGAAGATGG
TTTAAACAACCGTTGGGTAGATGTCTATGAGAATAAAGGAAAGCGTAGTGGAGCTTATTCATCTGGAACATATGGAACGA
ATCCATATATTCTAATGAACTGGCAAGATAACGTGAATAACTTATTTACCCTTACACATGAATTTGGACATAGTGTTCAC
AGTTATTACACGAGAAAATCACAACCATATCCATATGGTAACTATTCTATCTTCGTTGCAGAAGTAGCTTCTACTTGTAA
TGAAGCCTTACTAAATGATCATTTATTAAAAACGACAACAGACCCTAAAAAGCGCCTGTATCTATTAAATCACTTCTTAG
AAGGTTTTAGAGGAACGGTATTCAGACAAACAATGTTTGCTGAATTCGAGTTATTAATTCATCAAAAAGCACAAGAAGGA
GAAGCGTTAACAGCTGAACTTCTTACTAAAGAGTACTATGCTTTAAATGAAAAATATTTTGGAAAAGATAATATGGTAAT
CGATGAAGAAATCGGTCTAGAATGGGCTAGAATTCCGCACTTCTACTATAACTTCTATGTATACCAATACGCTACAGGAT
ACAGTGCAGCAACTGCGTTAAGTAAACAAATTCTTGAAGAAGGTCAACCGGCAGTGGATCGCTATGTTGAGTTCTTAAAA
GCTGGAAGCTCTGATTATCCTATTGAAGTATTGAAAAAAGCTGGAGTGGATATGACAACTTCTAAGCCAATTGAAGATGC
TTGTAAAGTGTTTGAGGAAAAATTAGCGGAAATGGAACAGCTTTTAGAAGAATTGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(118-187)

Peptidase family M3 (Peptidase_M3)

(209-589)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S8C9W1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

48.911

98.678

0.483