Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   MYY_RS01275 Genome accession   NC_017769
Coordinates   224971..225411 (-) Length   146 a.a.
NCBI ID   WP_000861967.1    Uniprot ID   -
Organism   Streptococcus pneumoniae ST556     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 219971..230411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MYY_RS01255 (MYY_0241) nrdI 220473..220943 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  MYY_RS01260 (MYY_0242) - 221249..222595 (-) 1347 WP_001828426.1 IS1380-like element ISSpn5 family transposase -
  MYY_RS01265 (MYY_0243) - 222944..224206 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  MYY_RS01270 (MYY_0244) - 224516..224974 (-) 459 WP_000745055.1 DUF3021 domain-containing protein -
  MYY_RS01275 (MYY_0245) brsR 224971..225411 (-) 441 WP_000861967.1 LytTR family DNA-binding domain-containing protein Regulator
  MYY_RS13520 (MYY_02390) - 225499..225624 (-) 126 WP_001822433.1 hypothetical protein -
  MYY_RS01280 (MYY_0247) hexB 225767..227716 (+) 1950 WP_000018164.1 DNA mismatch repair endonuclease MutL Machinery gene
  MYY_RS01285 (MYY_0248) ribE 228041..228508 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  MYY_RS01290 (MYY_0249) - 228509..229714 (-) 1206 WP_001814751.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  MYY_RS01295 (MYY_0250) ribE 229734..230369 (-) 636 WP_000493846.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17151.84 Da        Isoelectric Point: 5.9797

>NTDB_id=42757 MYY_RS01275 WP_000861967.1 224971..225411(-) (brsR) [Streptococcus pneumoniae ST556]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLIEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=42757 MYY_RS01275 WP_000861967.1 224971..225411(-) (brsR) [Streptococcus pneumoniae ST556]
ATGAAAGTAGAATTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
TCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGATAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.735

100

0.37

Multiple sequence alignment