Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   G7X27_RS14660 Genome accession   NZ_CP049741
Coordinates   2993836..2994480 (-) Length   214 a.a.
NCBI ID   WP_165541257.1    Uniprot ID   -
Organism   Bacillus velezensis strain UB2017     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2988836..2999480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7X27_RS14625 - 2990021..2990452 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  G7X27_RS14630 - 2990452..2990793 (+) 342 WP_032876807.1 Na(+)/H(+) antiporter subunit C -
  G7X27_RS14635 - 2990786..2992267 (+) 1482 WP_032876804.1 Na+/H+ antiporter subunit D -
  G7X27_RS14640 - 2992273..2992749 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  G7X27_RS14645 - 2992749..2993033 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  G7X27_RS14650 mnhG 2993017..2993391 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  G7X27_RS14655 - 2993431..2993814 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  G7X27_RS14660 comA 2993836..2994480 (-) 645 WP_165541257.1 response regulator transcription factor Regulator
  G7X27_RS14665 comP 2994561..2996861 (-) 2301 WP_032876801.1 histidine kinase Regulator
  G7X27_RS14670 comX 2996875..2997048 (-) 174 WP_012118314.1 competence pheromone ComX -
  G7X27_RS14675 - 2997017..2997877 (-) 861 WP_142925231.1 polyprenyl synthetase family protein -
  G7X27_RS14680 degQ 2998085..2998225 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  G7X27_RS14690 - 2998691..2999032 (+) 342 WP_032876795.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24301.71 Da        Isoelectric Point: 4.9953

>NTDB_id=427567 G7X27_RS14660 WP_165541257.1 2993836..2994480(-) (comA) [Bacillus velezensis strain UB2017]
MKKILVIDDHPAVMESTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=427567 G7X27_RS14660 WP_165541257.1 2993836..2994480(-) (comA) [Bacillus velezensis strain UB2017]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGAGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTTGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGTCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(153-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

85.981

100

0.86