Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   G7057_RS11440 Genome accession   NZ_CP049740
Coordinates   2288378..2290057 (-) Length   559 a.a.
NCBI ID   WP_166163857.1    Uniprot ID   A0A6G7KCL4
Organism   Jeotgalibaca arthritidis strain CECT 9157     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2283378..2295057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7057_RS11420 (G7057_11420) - 2284211..2285446 (-) 1236 WP_166163851.1 methionine gamma-lyase family protein -
  G7057_RS11425 (G7057_11425) hflX 2285439..2286692 (-) 1254 WP_166163853.1 GTPase HflX -
  G7057_RS11430 (G7057_11430) miaA 2286693..2287628 (-) 936 WP_227004603.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -
  G7057_RS11435 (G7057_11435) - 2287621..2288355 (-) 735 WP_166163855.1 glycerophosphodiester phosphodiesterase family protein -
  G7057_RS11440 (G7057_11440) recN 2288378..2290057 (-) 1680 WP_166163857.1 DNA repair protein RecN Machinery gene
  G7057_RS11445 (G7057_11445) - 2290079..2290915 (-) 837 WP_166163859.1 TlyA family RNA methyltransferase -
  G7057_RS11450 (G7057_11450) - 2290917..2291828 (-) 912 WP_166163861.1 polyprenyl synthetase family protein -
  G7057_RS11455 (G7057_11455) - 2291844..2292077 (-) 234 WP_076765889.1 exodeoxyribonuclease VII small subunit -
  G7057_RS11460 (G7057_11460) xseA 2292070..2293410 (-) 1341 WP_166163863.1 exodeoxyribonuclease VII large subunit -
  G7057_RS11465 (G7057_11465) - 2293420..2294268 (-) 849 WP_166163865.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  G7057_RS11470 (G7057_11470) nusB 2294379..2294828 (-) 450 WP_166163867.1 transcription antitermination factor NusB -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 63001.29 Da        Isoelectric Point: 4.6957

>NTDB_id=427506 G7057_RS11440 WP_166163857.1 2288378..2290057(-) (recN) [Jeotgalibaca arthritidis strain CECT 9157]
MLQELSIKNFAIIDSLRIGFEGGMTVLTGETGAGKSIIIDAVGLLAGGRGSTDLIRHGEDKTVLQGLFTFPKSNNLKERL
ETYGIDYDDDQILLQRELSRNGKNVARVNGSIVTVSILREIASHLIDIHGQNEHQELMNAQNHLYLLDQFADELTKKQLL
RYQADYDAYKQAKEELERLQSDEQENIQRIDLLTFQIDEIEQAKLIDNEEDSLLEERSLLANYQRILEGLTNAYRSLQGE
EGSAAIDQIGFGMESLERIQDFSPAYAGFYSSISEAYYQLEDVIASIRNEVDDLSYDEGRLNEIELRLEVIHQLKRKYGA
SILEIKAYYEKIVLELDMISNKESYIARLTKEFNQAKETVEKTGQTLSTMRHKVAKKLEADVEKQLKELYMEKATFKVHF
NEPAGTIYSDGLDQVEFYIATNVGEPLKPLTKVASGGELSRMMLALKTIFTQTQGITSIIFDEVDTGVSGRVAQAIANKI
HVVAAHSQVLCISHLPQVAAMADHHFYIEKEVTDNRTLTHVNAINEDKRTMEIARMLAGSDITELSIAHAKELLDLAKQ

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=427506 G7057_RS11440 WP_166163857.1 2288378..2290057(-) (recN) [Jeotgalibaca arthritidis strain CECT 9157]
ATGCTTCAAGAATTATCCATTAAAAATTTTGCTATTATCGATAGCCTTAGAATTGGATTCGAAGGCGGTATGACGGTTCT
AACAGGTGAAACGGGAGCAGGTAAATCCATTATTATTGATGCTGTTGGATTGTTAGCGGGTGGACGAGGATCAACTGACT
TAATTCGTCATGGTGAAGATAAAACCGTCTTACAAGGTTTGTTTACTTTTCCAAAATCAAATAATTTGAAAGAACGACTA
GAGACGTATGGGATTGATTATGATGACGACCAAATTTTATTGCAAAGAGAATTATCTCGTAATGGCAAAAATGTGGCCCG
TGTTAATGGAAGTATCGTAACGGTTTCTATTTTACGTGAGATTGCCAGCCATTTAATTGATATTCATGGCCAAAACGAGC
ATCAAGAACTCATGAATGCCCAAAATCACCTTTATTTGTTGGACCAATTTGCTGATGAGCTGACTAAAAAACAGTTGCTA
CGTTACCAAGCGGATTACGATGCTTATAAACAGGCTAAAGAAGAACTGGAACGTTTGCAATCAGACGAGCAGGAAAATAT
TCAACGGATTGATCTACTGACCTTTCAAATTGATGAAATCGAACAAGCGAAGCTTATTGATAATGAAGAAGACAGTTTAC
TAGAAGAACGCAGTTTACTGGCAAACTATCAACGTATTTTAGAAGGATTAACGAATGCTTATCGGTCACTTCAAGGCGAA
GAAGGTAGTGCAGCCATTGATCAGATTGGTTTTGGTATGGAATCACTTGAACGTATTCAAGATTTTAGCCCTGCCTATGC
TGGCTTTTATAGCAGCATATCAGAAGCTTATTATCAATTAGAAGATGTGATTGCATCTATTCGAAATGAAGTTGATGATT
TAAGCTATGATGAAGGACGGTTGAATGAAATCGAGCTTCGACTAGAAGTTATTCATCAGTTAAAACGAAAATATGGCGCT
TCAATCCTAGAAATTAAAGCGTATTATGAAAAGATTGTCTTAGAACTCGATATGATTTCGAATAAAGAAAGCTATATTGC
ACGTCTAACAAAAGAATTTAACCAAGCTAAAGAAACGGTTGAGAAGACGGGGCAAACATTAAGCACAATGAGGCATAAAG
TTGCTAAAAAGCTTGAAGCAGATGTTGAAAAACAGTTAAAAGAACTATATATGGAGAAAGCAACATTTAAGGTTCATTTT
AATGAACCGGCTGGAACCATTTATTCAGACGGCTTAGACCAAGTTGAATTCTACATCGCAACAAACGTTGGTGAACCGTT
AAAACCATTGACTAAAGTAGCCAGTGGTGGTGAGTTATCACGGATGATGTTAGCCCTAAAAACAATTTTCACTCAAACTC
AAGGCATAACTAGTATTATTTTTGATGAGGTAGACACAGGTGTAAGTGGTCGTGTTGCCCAAGCAATCGCTAATAAAATT
CATGTTGTTGCTGCTCATTCACAAGTCTTATGTATCAGTCATCTGCCTCAAGTAGCTGCTATGGCAGACCATCATTTTTA
CATTGAAAAAGAAGTCACTGACAACCGTACGCTGACTCATGTTAATGCGATCAATGAAGATAAACGCACGATGGAAATTG
CGCGTATGTTAGCTGGTAGTGATATTACTGAACTGTCAATTGCTCACGCCAAGGAATTACTAGATTTGGCAAAACAATAG

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G7KCL4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.738

100

0.51