Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GTQ41_RS25915 Genome accession   NZ_CP049737
Coordinates   5721499..5721903 (-) Length   134 a.a.
NCBI ID   WP_041063509.1    Uniprot ID   -
Organism   Pseudomonas sp. AN-B15     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5716499..5726903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GTQ41_RS25900 (GTQ41_25935) - 5718314..5720368 (-) 2055 WP_047297130.1 methyl-accepting chemotaxis protein -
  GTQ41_RS25905 (GTQ41_25940) - 5720523..5721062 (-) 540 WP_047297131.1 chemotaxis protein CheW -
  GTQ41_RS25910 (GTQ41_25945) pilH 5721073..5721438 (-) 366 WP_047297146.1 twitching motility response regulator PilH -
  GTQ41_RS25915 (GTQ41_25950) pilG 5721499..5721903 (-) 405 WP_041063509.1 twitching motility response regulator PilG Regulator
  GTQ41_RS25920 (GTQ41_25955) gshB 5722129..5723100 (+) 972 WP_041063511.1 glutathione synthase -
  GTQ41_RS25925 (GTQ41_25960) - 5723208..5724107 (+) 900 WP_007964106.1 energy transducer TonB -
  GTQ41_RS25930 (GTQ41_25965) - 5724343..5724915 (+) 573 WP_011336368.1 YqgE/AlgH family protein -
  GTQ41_RS25935 (GTQ41_25970) ruvX 5724915..5725352 (+) 438 WP_003229101.1 Holliday junction resolvase RuvX -
  GTQ41_RS25940 (GTQ41_25975) pyrR 5725433..5725939 (+) 507 WP_047297132.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14593.98 Da        Isoelectric Point: 6.4579

>NTDB_id=427430 GTQ41_RS25915 WP_041063509.1 5721499..5721903(-) (pilG) [Pseudomonas sp. AN-B15]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=427430 GTQ41_RS25915 WP_041063509.1 5721499..5721903(-) (pilG) [Pseudomonas sp. AN-B15]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACGCTGTT
GAAGAATGTGGGCTGCGAGGTCATCACGGCCATCGACGGCTTCGACGCGTTGGCCAAGATCGCCGACAATCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCAGTGATCATGCTGTCGTCGCGTGACGGACTGTTCGACAAGGCCAAGGGGCGCATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCGACGCGATTCAGGCCCACGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694