Detailed information NTG0427394

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G3T20_RS03565
• Genome accession: NZ_CP049736
• Coordinates: 747971..749161 (+)
• Length: 396 a.a.
• NCBI ID: WP_165553621.1
• Uniprot ID: -
• Organism: Bordetella hinzii strain FY01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 742971..754161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3T20_RS03540 (G3T20_03540)	-	744829..745212 (+)	384	WP_029578345.1	MOSC N-terminal beta barrel domain-containing protein	-
G3T20_RS03545 (G3T20_03545)	-	745209..746420 (-)	1212	WP_032955491.1	benzoate/H(+) symporter BenE family transporter	-
G3T20_RS03550 (G3T20_03550)	-	746417..746671 (-)	255	WP_029578347.1	YfhL family 4Fe-4S dicluster ferredoxin	-
G3T20_RS03555 (G3T20_03555)	coaD	746742..747254 (-)	513	WP_029578348.1	pantetheine-phosphate adenylyltransferase	-
G3T20_RS03560 (G3T20_03560)	rsmD	747278..747898 (-)	621	WP_185843352.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G3T20_RS03565 (G3T20_03565)	pilA	747971..749161 (+)	1191	WP_165553621.1	signal recognition particle-docking protein FtsY	Machinery gene
G3T20_RS03570 (G3T20_03570)	-	749172..750755 (-)	1584	WP_165553623.1	CYTH and CHAD domain-containing protein	-
G3T20_RS03575 (G3T20_03575)	phnE	750943..751764 (-)	822	WP_029578352.1	phosphonate ABC transporter, permease protein PhnE	-
G3T20_RS03580 (G3T20_03580)	phnE	751761..752624 (-)	864	WP_029578353.1	phosphonate ABC transporter, permease protein PhnE	-
G3T20_RS03585 (G3T20_03585)	phnC	752612..753382 (-)	771	WP_029578354.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 396 a.a.
• Molecular weight: 41165.41 Da
• Isoelectric Point: 6.1686

>NTDB_id=427394 G3T20_RS03565 WP_165553621.1 747971..749161(+) (pilA) [Bordetella hinzii strain FY01]
MFSFFKKKTPPPAAPATPAPPPKPVVQPAEPVPPPADPSPVDTAPVEPIPAQAAPLEPAAVEPAPVAPPPVPPQAAPEPV
SEPVSEPAAAAPKKASWLSRLKQGLARTGQSLGGIFVGVKVDENLFEELESALIMADAGMEATEKLLTALRARVKKERIE
DPAQVKAALRQLLAEHLKPLERGFDLRRSQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIE
WGSRNNVTVIAQEGGDPAAVAFDAVNAGRARGAGVVMIDTAGRLPTQLHLMEELKKIRRVIGKADAAAPHEVLLVVDGNT
GQNALAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGEGLEDLQPFVAEEFATALSAD

Nucleotide

• Length: 1191 bp

>NTDB_id=427394 G3T20_RS03565 WP_165553621.1 747971..749161(+) (pilA) [Bordetella hinzii strain FY01]
ATGTTCAGCTTCTTCAAGAAAAAGACTCCTCCGCCCGCCGCGCCGGCCACGCCCGCGCCGCCGCCGAAGCCCGTCGTCCA
GCCGGCCGAGCCCGTCCCGCCGCCCGCTGACCCGTCCCCCGTTGATACGGCCCCCGTTGAGCCGATTCCTGCTCAAGCGG
CTCCCCTTGAACCGGCGGCCGTCGAACCGGCGCCTGTCGCCCCGCCGCCCGTGCCCCCGCAGGCCGCGCCCGAGCCGGTA
TCCGAGCCGGTATCCGAGCCGGCCGCCGCCGCGCCCAAGAAGGCGTCCTGGCTCAGCCGGCTCAAGCAGGGGCTGGCGCG
CACCGGCCAGAGCCTCGGCGGCATTTTCGTCGGCGTCAAAGTCGACGAAAACCTGTTCGAGGAGCTGGAGTCGGCCCTCA
TCATGGCCGATGCGGGCATGGAGGCCACCGAAAAACTGCTCACGGCCCTGCGCGCCCGCGTCAAGAAAGAACGCATCGAG
GATCCCGCCCAGGTCAAGGCGGCGCTGCGCCAATTGCTGGCCGAGCACCTCAAGCCGCTGGAGCGCGGCTTCGACCTGCG
GCGCAGCCAGCCCCTGGTGGTGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAACTGGCCCACA
CCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCCGCGGGCGACACCTTCCGCGCCGCGGCGCGCGAGCAACTGATCGAA
TGGGGCAGCCGCAACAACGTCACCGTCATCGCCCAGGAGGGCGGCGACCCGGCGGCGGTGGCGTTTGACGCCGTCAACGC
GGGCCGCGCGCGCGGCGCCGGCGTGGTCATGATAGACACCGCGGGGCGCCTGCCGACACAGCTGCACCTGATGGAAGAGC
TCAAGAAAATCCGCCGCGTCATCGGCAAGGCCGATGCGGCCGCGCCCCATGAAGTGCTGTTGGTGGTCGACGGCAATACG
GGCCAGAACGCGCTGGCCCAGATCCGCGCCTTTGACGCCGCCATCCAGCTCACCGGCCTGGTGGTGACCAAGCTGGACGG
CACCGCCAAGGGCGGCACGCTGGCCGCGGTCGCGGCCGGCAGCCAGGGCGTGCGCCCCGTGCCGGTCTATTGGATCGGCG
TGGGCGAGGGGCTCGAAGACCTGCAGCCCTTCGTGGCCGAGGAGTTCGCCACCGCGCTGTCGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (192-393)

• SRP54-type protein, helical bundle domain (SRP54_N) (110-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50	100	0.538