Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IF722_RS09275 Genome accession   NZ_CP062360
Coordinates   1897635..1898453 (-) Length   272 a.a.
NCBI ID   WP_098818155.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_157     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1892635..1903453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF722_RS09255 (IF722_09210) - 1893728..1894705 (+) 978 WP_072491836.1 metal-dependent hydrolase -
  IF722_RS09260 (IF722_09215) - 1894966..1895802 (-) 837 WP_072491835.1 hypothetical protein -
  IF722_RS09265 (IF722_09220) - 1895811..1897328 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  IF722_RS09270 (IF722_09225) - 1897343..1897657 (-) 315 WP_000435806.1 YfhH family protein -
  IF722_RS09275 (IF722_09230) recX 1897635..1898453 (-) 819 WP_098818155.1 recombination regulator RecX Regulator
  IF722_RS09280 (IF722_09235) sgtB 1898714..1899523 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  IF722_RS09285 (IF722_09240) - 1899863..1900378 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  IF722_RS09290 (IF722_09245) - 1900508..1900669 (-) 162 WP_001005407.1 SE1561 family protein -
  IF722_RS09295 (IF722_09250) yfkAB 1900893..1902044 (+) 1152 WP_106875266.1 radical SAM/CxCxxxxC motif protein YfkAB -
  IF722_RS09300 (IF722_09255) - 1902304..1902834 (-) 531 WP_000184381.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32241.06 Da        Isoelectric Point: 5.9211

>NTDB_id=427339 IF722_RS09275 WP_098818155.1 1897635..1898453(-) (recX) [Staphylococcus aureus strain NAS_AN_157]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEIETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=427339 IF722_RS09275 WP_098818155.1 1897635..1898453(-) (recX) [Staphylococcus aureus strain NAS_AN_157]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATAGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993