Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SMULJ23_RS05295 Genome accession   NC_017768
Coordinates   1073382..1074053 (-) Length   223 a.a.
NCBI ID   WP_014678012.1    Uniprot ID   Q8VUH0
Organism   Streptococcus mutans LJ23     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1068382..1079053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMULJ23_RS05275 (SMULJ23_1019) - 1069471..1070160 (+) 690 WP_002269136.1 GntR family transcriptional regulator -
  SMULJ23_RS05280 (SMULJ23_1020) citG 1070166..1071056 (+) 891 WP_002265082.1 triphosphoribosyl-dephospho-CoA synthase CitG -
  SMULJ23_RS05285 (SMULJ23_1021) citC 1071232..1072281 (+) 1050 WP_002270831.1 [citrate (pro-3S)-lyase] ligase -
  SMULJ23_RS05290 (SMULJ23_1022) - 1072432..1073385 (-) 954 WP_002270830.1 sensor histidine kinase -
  SMULJ23_RS05295 (SMULJ23_1023) braR 1073382..1074053 (-) 672 WP_014678012.1 response regulator transcription factor Regulator
  SMULJ23_RS05300 (SMULJ23_1024) - 1074095..1076098 (-) 2004 WP_002263238.1 ABC transporter permease -
  SMULJ23_RS05305 (SMULJ23_1025) - 1076100..1076852 (-) 753 WP_002265085.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 223 a.a.        Molecular weight: 25828.94 Da        Isoelectric Point: 5.0036

>NTDB_id=42693 SMULJ23_RS05295 WP_014678012.1 1073382..1074053(-) (braR) [Streptococcus mutans LJ23]
MLKQEKIYLVEDDTTIVNLLKNHLGQHYQVKSVDNFRAILQEVKEFKPDLILMDITLPYFNGFYWTTEIRKSMTMPIIFI
SSADEEMNAVMAMNMGGDDFLSKPFSLPILDAKIAAFLRRANEFTKQGHQIEEFELTLDGVFSNLERQETIQLTPTETKI
LSLLIDYKGEVVTKEALLNRLWEGEEFIDQNTLSVNMTRLRKKVLSVSFDKIYTVRGVGYLIK

Nucleotide


Download         Length: 672 bp        

>NTDB_id=42693 SMULJ23_RS05295 WP_014678012.1 1073382..1074053(-) (braR) [Streptococcus mutans LJ23]
ATGCTAAAGCAAGAAAAAATTTACTTGGTTGAAGATGATACAACCATTGTCAATCTTTTAAAGAATCATTTGGGACAACA
CTATCAAGTTAAAAGCGTTGATAACTTTAGGGCTATCTTGCAAGAAGTTAAAGAATTTAAACCCGATTTAATTCTGATGG
ATATTACTTTGCCCTATTTCAATGGCTTTTATTGGACTACTGAAATCAGAAAGAGCATGACCATGCCCATTATCTTTATT
TCCAGTGCTGATGAAGAAATGAATGCAGTAATGGCTATGAATATGGGAGGTGATGATTTTTTGAGCAAGCCTTTCTCGCT
GCCTATTTTGGATGCCAAAATCGCTGCTTTCTTGCGCCGTGCTAACGAGTTCACTAAGCAAGGCCATCAAATTGAAGAGT
TTGAATTAACGTTAGATGGTGTATTCTCAAATTTAGAAAGACAAGAGACTATCCAATTGACTCCAACAGAAACGAAAATT
CTTTCCTTACTTATTGATTATAAAGGAGAGGTTGTCACTAAGGAAGCTCTTCTCAACCGACTATGGGAGGGAGAGGAATT
TATTGATCAAAACACGCTTAGTGTCAATATGACACGTCTTCGTAAAAAGGTTCTATCAGTAAGTTTTGATAAGATTTATA
CAGTAAGAGGAGTAGGGTATTTAATTAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8VUH0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

43.498

100

0.435


Multiple sequence alignment