Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SMULJ23_RS03455 Genome accession   NC_017768
Coordinates   700886..701365 (+) Length   159 a.a.
NCBI ID   WP_002302426.1    Uniprot ID   -
Organism   Streptococcus mutans LJ23     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 695886..706365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMULJ23_RS03430 (SMULJ23_0652) - 696374..697162 (+) 789 WP_002265199.1 Nif3-like dinuclear metal center hexameric protein -
  SMULJ23_RS03435 (SMULJ23_0653) rfbA 697458..698327 (+) 870 WP_002263084.1 glucose-1-phosphate thymidylyltransferase RfbA -
  SMULJ23_RS03440 (SMULJ23_0654) - 698329..698925 (+) 597 WP_014677893.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  SMULJ23_RS10645 (SMULJ23_0655) - 698988..699161 (+) 174 WP_002263086.1 hypothetical protein -
  SMULJ23_RS03445 (SMULJ23_0656) rfbB 699545..700591 (+) 1047 WP_002312970.1 dTDP-glucose 4,6-dehydratase -
  SMULJ23_RS03455 (SMULJ23_0658) mutX 700886..701365 (+) 480 WP_002302426.1 8-oxo-dGTP diphosphatase Machinery gene
  SMULJ23_RS03460 (SMULJ23_0659) - 701434..702603 (+) 1170 WP_014677894.1 AI-2E family transporter -
  SMULJ23_RS03465 (SMULJ23_0660) - 702593..703825 (+) 1233 WP_002267741.1 tetratricopeptide repeat protein -
  SMULJ23_RS03470 (SMULJ23_0661) alsS 703958..705637 (+) 1680 WP_014677895.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18928.64 Da        Isoelectric Point: 5.6576

>NTDB_id=42680 SMULJ23_RS03455 WP_002302426.1 700886..701365(+) (mutX) [Streptococcus mutans LJ23]
MIKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILEDAPFFSAKFVYQEQKLVDKHVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=42680 SMULJ23_RS03455 WP_002302426.1 700886..701365(+) (mutX) [Streptococcus mutans LJ23]
ATGATAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGCAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGAAG
ATGCCCCCTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAACATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(5-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

99.371

0.692

Multiple sequence alignment