Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IF738_RS00880 Genome accession   NZ_CP062348
Coordinates   174106..174909 (+) Length   267 a.a.
NCBI ID   WP_001134193.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_260     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 169106..179909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF738_RS00860 (IF738_00860) - 170652..171989 (+) 1338 WP_000812834.1 aminotransferase class V-fold PLP-dependent enzyme -
  IF738_RS00865 (IF738_00865) tmk 171991..172608 (+) 618 WP_001272131.1 dTMP kinase -
  IF738_RS00870 (IF738_00870) - 172636..172965 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  IF738_RS00875 (IF738_00875) - 173179..174105 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  IF738_RS00880 (IF738_00880) yaaT 174106..174909 (+) 804 WP_001134193.1 stage 0 sporulation family protein Regulator
  IF738_RS00885 (IF738_00885) yabA 174926..175273 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  IF738_RS00890 (IF738_00890) - 175547..176272 (+) 726 WP_000910684.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  IF738_RS00895 (IF738_00895) - 176265..176513 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  IF738_RS00900 (IF738_00900) rsmI 176515..177354 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IF738_RS00905 (IF738_00905) metG 177639..179612 (+) 1974 WP_240024505.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30204.83 Da        Isoelectric Point: 4.5759

>NTDB_id=426736 IF738_RS00880 WP_001134193.1 174106..174909(+) (yaaT) [Staphylococcus aureus strain NAS_AN_260]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=426736 IF738_RS00880 WP_001134193.1 174106..174909(+) (yaaT) [Staphylococcus aureus strain NAS_AN_260]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622