Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2754_RS08240 | Genome accession | NZ_CP049683 |
| Coordinates | 1620820..1621488 (+) | Length | 222 a.a. |
| NCBI ID | WP_215271970.1 | Uniprot ID | - |
| Organism | Polynucleobacter paneuropaeus strain AP-RePozz10-5-G5 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1615820..1626488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2754_RS08220 (C2754_08215) | - | 1617356..1617937 (-) | 582 | WP_112208668.1 | DUF4390 domain-containing protein | - |
| C2754_RS08225 (C2754_08220) | rsmB | 1617934..1619292 (-) | 1359 | WP_244973672.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2754_RS08230 (C2754_08225) | fmt | 1619234..1620223 (-) | 990 | WP_112208670.1 | methionyl-tRNA formyltransferase | - |
| C2754_RS08235 (C2754_08230) | def | 1620233..1620748 (-) | 516 | WP_112295124.1 | peptide deformylase | - |
| C2754_RS08240 (C2754_08235) | dprA | 1620820..1621488 (+) | 669 | WP_215271970.1 | DNA-processing protein DprA | Machinery gene |
| C2754_RS08245 (C2754_08240) | - | 1621706..1624369 (+) | 2664 | WP_112318547.1 | DNA topoisomerase III | - |
| C2754_RS08335 (C2754_08245) | mnmC | 1624429..1625430 (-) | 1002 | Protein_1608 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 222 a.a. Molecular weight: 23300.25 Da Isoelectric Point: 7.9593
>NTDB_id=426546 C2754_RS08240 WP_215271970.1 1620820..1621488(+) (dprA) [Polynucleobacter paneuropaeus strain AP-RePozz10-5-G5]
MKNELPANSILPLALGATNYPKRLLDLADPPRTIYIAGKIELLSVPMIAIVGSRVASPEGIKNAGYFARTLASEGLLVIS
GLARGIDGASHRAALAVGQPTLAICGTGLDLTYPPEHHELANEIQKNGLLLGELPLGIGPKAFHFPRRNRLIAALAIGVL
VVEAAQQSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
MKNELPANSILPLALGATNYPKRLLDLADPPRTIYIAGKIELLSVPMIAIVGSRVASPEGIKNAGYFARTLASEGLLVIS
GLARGIDGASHRAALAVGQPTLAICGTGLDLTYPPEHHELANEIQKNGLLLGELPLGIGPKAFHFPRRNRLIAALAIGVL
VVEAAQQSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
Nucleotide
Download Length: 669 bp
>NTDB_id=426546 C2754_RS08240 WP_215271970.1 1620820..1621488(+) (dprA) [Polynucleobacter paneuropaeus strain AP-RePozz10-5-G5]
ATGAAAAATGAACTGCCAGCCAACTCTATTTTGCCCCTAGCTTTAGGTGCTACAAACTATCCCAAACGCCTTCTTGACTT
GGCCGATCCTCCGCGCACTATTTATATAGCAGGAAAAATAGAGTTGCTGAGTGTGCCCATGATCGCTATTGTTGGCTCTC
GGGTAGCTAGCCCAGAAGGAATCAAAAATGCCGGTTACTTTGCTAGAACCCTTGCCAGCGAGGGCCTACTAGTCATTTCT
GGCTTGGCCAGGGGCATTGATGGGGCTTCGCACCGGGCAGCCCTTGCGGTGGGCCAACCCACATTAGCAATCTGCGGCAC
CGGCCTAGATCTCACCTACCCACCTGAACATCATGAGTTAGCGAATGAAATTCAGAAAAATGGTCTTTTATTGGGCGAGC
TGCCCTTAGGCATAGGACCCAAGGCCTTTCACTTCCCGCGTCGCAACCGCCTGATTGCAGCCCTGGCCATAGGGGTTTTA
GTGGTAGAAGCCGCCCAGCAATCGGGCTCACTTATTACGGCCCGCCTTGCATTGGAATTGGGCAGAGAAGTTTTTGCCAT
ACCCTCCTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGGGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
ATGAAAAATGAACTGCCAGCCAACTCTATTTTGCCCCTAGCTTTAGGTGCTACAAACTATCCCAAACGCCTTCTTGACTT
GGCCGATCCTCCGCGCACTATTTATATAGCAGGAAAAATAGAGTTGCTGAGTGTGCCCATGATCGCTATTGTTGGCTCTC
GGGTAGCTAGCCCAGAAGGAATCAAAAATGCCGGTTACTTTGCTAGAACCCTTGCCAGCGAGGGCCTACTAGTCATTTCT
GGCTTGGCCAGGGGCATTGATGGGGCTTCGCACCGGGCAGCCCTTGCGGTGGGCCAACCCACATTAGCAATCTGCGGCAC
CGGCCTAGATCTCACCTACCCACCTGAACATCATGAGTTAGCGAATGAAATTCAGAAAAATGGTCTTTTATTGGGCGAGC
TGCCCTTAGGCATAGGACCCAAGGCCTTTCACTTCCCGCGTCGCAACCGCCTGATTGCAGCCCTGGCCATAGGGGTTTTA
GTGGTAGAAGCCGCCCAGCAATCGGGCTCACTTATTACGGCCCGCCTTGCATTGGAATTGGGCAGAGAAGTTTTTGCCAT
ACCCTCCTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGGGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.