Detailed information NTG0426511

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: C2753_RS07545
• Genome accession: NZ_CP049680
• Coordinates: 1497369..1498259 (+)
• Length: 296 a.a.
• NCBI ID: WP_215279257.1
• Uniprot ID: -
• Organism: Polynucleobacter paneuropaeus strain AP-RePozz9-5-G2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1492369..1503259

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2753_RS07515 (C2753_07520)	pth	1492600..1493190 (+)	591	WP_112208576.1	aminoacyl-tRNA hydrolase	-
C2753_RS07520 (C2753_07525)	-	1493187..1493450 (-)	264	WP_112205456.1	YfhL family 4Fe-4S dicluster ferredoxin	-
C2753_RS07525 (C2753_07530)	coaD	1493469..1493960 (-)	492	WP_112205458.1	pantetheine-phosphate adenylyltransferase	-
C2753_RS07530 (C2753_07535)	rsmD	1493996..1494601 (-)	606	WP_112205460.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
C2753_RS07535 (C2753_07540)	-	1494604..1495941 (-)	1338	WP_215273556.1	pitrilysin family protein	-
C2753_RS07540 (C2753_07545)	-	1495938..1497308 (-)	1371	WP_112208578.1	pitrilysin family protein	-
C2753_RS07545 (C2753_07550)	pilA	1497369..1498259 (+)	891	WP_215279257.1	signal recognition particle-docking protein FtsY	Machinery gene
C2753_RS07550 (C2753_07555)	rpoH	1498430..1499293 (+)	864	WP_244973723.1	RNA polymerase sigma factor RpoH	-
C2753_RS07555 (C2753_07560)	-	1499304..1499894 (-)	591	WP_112237267.1	SCO family protein	-
C2753_RS07560 (C2753_07565)	cyoE	1499896..1500789 (-)	894	WP_112208582.1	heme o synthase	-
C2753_RS07565 (C2753_07570)	-	1500786..1501916 (-)	1131	WP_215286041.1	COX15/CtaA family protein	-
C2753_RS07570 (C2753_07575)	-	1501916..1502572 (-)	657	WP_215286042.1	hypothetical protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 31876.61 Da
• Isoelectric Point: 6.4966

>NTDB_id=426511 C2753_RS07545 WP_215279257.1 1497369..1498259(+) (pilA) [Polynucleobacter paneuropaeus strain AP-RePozz9-5-G2]
MLGLRKTLGSLFKSSRIDEAWFDTLEDSLIQSDVGMPTCMQLMASLRQAAKSEKVQDSETLQALLIQELTRLLQALEAHP
NPIFEHQSSHHPEIWLIVGVNGAGKTTTIGKLCKQFQSQGKSILLAAGDTFRAAARNQLLEWGQRNEVDVIAQESGDAAA
VAHDAIHAAISRKTDILIIDTAGRLATQDHLMEELKKVKRVIAKVLPGAPHHTLLILDGNTGQNGLNQVKAFHEALGLTG
LIVTKLDGTAKGGVICALANTFQNGPKPAVLALGKGEGIEDLIPFNAAEYCAELFN

Nucleotide

• Length: 891 bp

>NTDB_id=426511 C2753_RS07545 WP_215279257.1 1497369..1498259(+) (pilA) [Polynucleobacter paneuropaeus strain AP-RePozz9-5-G2]
ATGCTTGGCCTACGTAAAACCCTCGGATCGCTTTTCAAATCAAGCCGGATTGATGAGGCCTGGTTTGATACTCTCGAAGA
CTCCCTGATTCAGAGTGATGTAGGTATGCCGACGTGCATGCAATTAATGGCCAGCTTACGTCAAGCTGCTAAATCAGAAA
AAGTACAAGACTCAGAAACCCTACAAGCATTATTGATTCAAGAACTCACAAGGCTATTACAAGCATTAGAGGCTCACCCA
AATCCCATCTTTGAACATCAAAGTAGTCATCATCCAGAAATCTGGCTCATTGTTGGTGTCAATGGCGCTGGCAAGACCAC
CACGATTGGTAAGCTCTGCAAACAATTCCAGTCACAAGGAAAGTCCATTCTTCTGGCTGCTGGAGACACTTTCCGTGCCG
CCGCACGTAATCAACTCTTAGAGTGGGGGCAACGCAATGAAGTCGATGTGATTGCCCAAGAAAGTGGCGATGCTGCAGCC
GTGGCACACGATGCTATTCATGCTGCGATTTCTCGTAAGACGGACATATTGATTATTGACACTGCAGGTAGGCTGGCCAC
ACAAGACCATTTGATGGAAGAACTGAAGAAGGTCAAACGCGTCATCGCCAAGGTCCTTCCAGGGGCGCCTCACCACACGC
TATTGATTTTGGATGGCAATACGGGCCAGAATGGTTTAAACCAAGTAAAGGCCTTCCACGAAGCGCTGGGACTCACTGGT
CTGATCGTTACCAAACTCGATGGGACTGCCAAAGGCGGGGTCATTTGCGCTCTTGCCAACACCTTTCAAAATGGCCCCAA
ACCTGCAGTTTTAGCGCTTGGCAAAGGCGAAGGAATCGAGGATCTAATCCCCTTCAATGCTGCAGAATATTGCGCTGAAT
TATTCAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (93-295)

• SRP54-type protein, helical bundle domain (SRP54_N) (4-69)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.536	98.986	0.51