Detailed information NTG0426500

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G7Z35_RS07420
• Genome accession: NZ_CP049679
• Coordinates: 1470098..1470988 (+)
• Length: 296 a.a.
• NCBI ID: WP_215279257.1
• Uniprot ID: -
• Organism: Polynucleobacter paneuropaeus strain AP-Creno-20-G10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1465098..1475988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G7Z35_RS07390 (G7Z35_07405)	pth	1465329..1465919 (+)	591	WP_112205454.1	aminoacyl-tRNA hydrolase	-
G7Z35_RS07395 (G7Z35_07410)	-	1465916..1466179 (-)	264	WP_112205456.1	YfhL family 4Fe-4S dicluster ferredoxin	-
G7Z35_RS07400 (G7Z35_07415)	coaD	1466198..1466689 (-)	492	WP_112314251.1	pantetheine-phosphate adenylyltransferase	-
G7Z35_RS07405 (G7Z35_07420)	rsmD	1466725..1467330 (-)	606	WP_112236737.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
G7Z35_RS07410 (G7Z35_07425)	-	1467333..1468670 (-)	1338	WP_215279255.1	pitrilysin family protein	-
G7Z35_RS07415 (G7Z35_07430)	-	1468667..1470037 (-)	1371	WP_215279256.1	pitrilysin family protein	-
G7Z35_RS07420 (G7Z35_07435)	pilA	1470098..1470988 (+)	891	WP_215279257.1	signal recognition particle-docking protein FtsY	Machinery gene
G7Z35_RS07425 (G7Z35_07440)	rpoH	1471159..1472022 (+)	864	WP_225971671.1	RNA polymerase sigma factor RpoH	-
G7Z35_RS07430 (G7Z35_07445)	-	1472033..1472623 (-)	591	WP_112237267.1	SCO family protein	-
G7Z35_RS07435 (G7Z35_07450)	cyoE	1472625..1473518 (-)	894	WP_112208582.1	heme o synthase	-
G7Z35_RS07440 (G7Z35_07455)	-	1473515..1474645 (-)	1131	WP_215279258.1	COX15/CtaA family protein	-
G7Z35_RS07445 (G7Z35_07460)	-	1474645..1475301 (-)	657	WP_112208583.1	hypothetical protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 31876.61 Da
• Isoelectric Point: 6.4966

>NTDB_id=426500 G7Z35_RS07420 WP_215279257.1 1470098..1470988(+) (pilA) [Polynucleobacter paneuropaeus strain AP-Creno-20-G10]
MLGLRKTLGSLFKSSRIDEAWFDTLEDSLIQSDVGMPTCMQLMASLRQAAKSEKVQDSETLQALLIQELTRLLQALEAHP
NPIFEHQSSHHPEIWLIVGVNGAGKTTTIGKLCKQFQSQGKSILLAAGDTFRAAARNQLLEWGQRNEVDVIAQESGDAAA
VAHDAIHAAISRKTDILIIDTAGRLATQDHLMEELKKVKRVIAKVLPGAPHHTLLILDGNTGQNGLNQVKAFHEALGLTG
LIVTKLDGTAKGGVICALANTFQNGPKPAVLALGKGEGIEDLIPFNAAEYCAELFN

Nucleotide

• Length: 891 bp

>NTDB_id=426500 G7Z35_RS07420 WP_215279257.1 1470098..1470988(+) (pilA) [Polynucleobacter paneuropaeus strain AP-Creno-20-G10]
ATGCTTGGCCTACGTAAAACCCTCGGATCGCTTTTCAAATCAAGCCGGATTGATGAGGCCTGGTTTGATACTCTCGAAGA
CTCCCTGATTCAGAGTGATGTAGGTATGCCGACGTGCATGCAATTAATGGCCAGCTTACGTCAAGCTGCTAAATCAGAAA
AAGTACAAGACTCAGAAACCCTACAAGCATTATTGATTCAAGAGCTCACCAGGCTATTACAAGCATTAGAGGCTCACCCA
AATCCCATCTTTGAACATCAAAGTAGTCATCATCCAGAAATCTGGCTCATTGTTGGTGTCAATGGCGCTGGCAAGACCAC
CACGATTGGTAAGCTCTGCAAACAATTCCAGTCACAAGGAAAGTCCATTCTTCTGGCTGCTGGAGACACTTTCCGTGCCG
CCGCACGTAATCAACTCTTAGAGTGGGGGCAACGCAATGAAGTCGATGTGATTGCCCAAGAAAGTGGCGATGCTGCAGCC
GTGGCACACGATGCTATTCATGCTGCGATTTCTCGTAAGACGGACATATTGATTATTGACACTGCAGGTAGGCTGGCCAC
ACAAGACCATTTGATGGAAGAACTGAAGAAGGTCAAACGCGTCATCGCCAAGGTCCTTCCAGGGGCGCCTCACCACACGC
TATTGATTTTGGATGGCAATACGGGCCAGAATGGTTTAAACCAAGTAAAGGCCTTCCACGAAGCGCTGGGACTCACTGGT
CTGATCGTTACCAAACTCGATGGGACTGCCAAAGGCGGGGTTATTTGCGCTCTTGCCAACACCTTTCAAAATGGCCCCAA
ACCTGCAGTTTTAGCGCTTGGCAAAGGCGAAGGAATCGAGGATCTAATCCCCTTCAATGCTGCAGAATATTGCGCTGAAT
TATTCAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (93-295)

• SRP54-type protein, helical bundle domain (SRP54_N) (4-69)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.536	98.986	0.51