Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   G7033_RS17545 Genome accession   NZ_CP049600
Coordinates   3728078..3728701 (+) Length   207 a.a.
NCBI ID   WP_047045642.1    Uniprot ID   -
Organism   Klebsiella aerogenes strain 18-2341     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3723078..3733701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7033_RS17525 (G7033_17525) - 3723223..3724980 (-) 1758 WP_047045638.1 AAA family ATPase -
  G7033_RS17530 (G7033_17530) matP 3725166..3725618 (+) 453 WP_015367432.1 macrodomain Ter protein MatP -
  G7033_RS17535 (G7033_17535) ompA 3725713..3726765 (-) 1053 WP_080473199.1 porin OmpA -
  G7033_RS17540 (G7033_17540) sulA 3727118..3727627 (-) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  G7033_RS17545 (G7033_17545) sxy/tfoX 3728078..3728701 (+) 624 WP_047045642.1 TfoX/Sxy family DNA transformation protein Regulator
  G7033_RS17550 (G7033_17550) yccS 3728689..3730824 (-) 2136 WP_047045644.1 YccS family putative transporter -
  G7033_RS17555 (G7033_17555) - 3730842..3731288 (-) 447 WP_045395640.1 YccF domain-containing protein -
  G7033_RS17560 (G7033_17560) helD 3731412..3733466 (+) 2055 WP_047045647.1 DNA helicase IV -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23598.19 Da        Isoelectric Point: 9.5354

>NTDB_id=426416 G7033_RS17545 WP_047045642.1 3728078..3728701(+) (sxy/tfoX) [Klebsiella aerogenes strain 18-2341]
MKKLSKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSAEYRVEHHSPMLTMRKNGRPVALK
YYRIDEALWQDSKMLFHLSELSLHTARSEKQHQRDSGRLKDLPNISFHMELMLIHAGITDVKMLRTIGAEKSWLKLREHN
KGISINVLESLAGAIAGTHSAALPAQRRQELREWANTQGYGVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=426416 G7033_RS17545 WP_047045642.1 3728078..3728701(+) (sxy/tfoX) [Klebsiella aerogenes strain 18-2341]
ATGAAGAAACTATCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCTCCCTTAGGCAAAATCAGTAGCCGGCCTCT
ATTTGGCGGTTACAGCCTGGCGATAGAGAATACCGTGTTTGCCATGGTGGCCGAAGGCGAAATCTATCTTAGAGTGTGTG
AGCAAAGCGCAGAATATCGCGTCGAGCATCATAGCCCAATGTTAACCATGCGCAAAAATGGTCGGCCGGTAGCGCTAAAA
TATTACCGTATAGATGAAGCATTATGGCAGGACAGTAAAATGCTGTTTCACCTCTCGGAGCTGTCTTTGCATACGGCGCG
TAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGGCTAAAAGATTTGCCTAATATTAGTTTCCACATGGAATTGATGTTGA
TTCATGCCGGAATAACCGATGTGAAAATGCTGCGTACAATTGGTGCGGAAAAAAGCTGGTTAAAATTGAGGGAGCATAAT
AAAGGGATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCACCCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACGCAAGGGTACGGCGTGGAGGATTATTCTGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

52.284

95.169

0.498