Detailed information NTG0426149

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: G5S32_RS02590
• Genome accession: NZ_CP049331
• Coordinates: 565152..568538 (-)
• Length: 1128 a.a.
• NCBI ID: WP_165310348.1
• Uniprot ID: A0A6G7CFX2
• Organism: Vibrio ziniensis strain ZWAL4003
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 560152..573538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5S32_RS02575 (G5S32_02575)	-	560285..561310 (-)	1026	WP_165310345.1	ABC transporter permease	-
G5S32_RS02580 (G5S32_02580)	-	561313..562299 (-)	987	WP_165310346.1	ABC transporter permease	-
G5S32_RS02585 (G5S32_02585)	-	562445..564115 (-)	1671	WP_165310347.1	ABC transporter substrate-binding protein	-
G5S32_RS02590 (G5S32_02590)	chiS	565152..568538 (-)	3387	WP_165310348.1	ATP-binding protein	Regulator
G5S32_RS02595 (G5S32_02595)	rsmC	568701..569726 (-)	1026	WP_165310349.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
G5S32_RS02600 (G5S32_02600)	-	569829..570914 (-)	1086	WP_165310350.1	AI-2E family transporter	-
G5S32_RS02605 (G5S32_02605)	-	570951..571109 (+)	159	WP_165309909.1	hypothetical protein	-
G5S32_RS02610 (G5S32_02610)	hemL	571154..572449 (-)	1296	WP_165310351.1	glutamate-1-semialdehyde 2,1-aminomutase	-
G5S32_RS02615 (G5S32_02615)	erpA	572742..573083 (+)	342	WP_165310352.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127594.24 Da
• Isoelectric Point: 5.8793

>NTDB_id=426149 G5S32_RS02590 WP_165310348.1 565152..568538(-) (chiS) [Vibrio ziniensis strain ZWAL4003]
MFRFYRRQKFKRLQNTLMLAFLVLSITPLTITAIFFLKSHIDDLQEQSTSHLLSVRDTKQQQVIDYLNAKESEVMGFVRS
ELAYASGGRFYGLVNAFSRLGEDIEQARENAQQRYILGSGDQVKTSVLPQSSSYVGSERYRLLHKRYHWAYMELLKRSDF
DDILLVDLNGNVTYSINKNEEYGTNLFSGKFKDANLGQTFQLLEKTVSEHRKTDEDYTPVILSDFIEENGQQYAWFGAPI
IQQGYLHSYAMFRLPNKGITKLIADSSSSAMQTLLVGQDHRSLTLSYLQDEIDKSGEVINLALSGKIDVGTYTDTLGEKN
IAAYAPINLKNTHGAIIVELPEKEAFARVNQLEKLFIFAMLTAIVLVVIASHMLSNFITAPLLRLTWAAERASAGDLDES
MINTERKDEIGRLAVSFERMQRSIREKIQLIKSQNSELEKNIQIIRKQNEELQLANKLKDEFLATTSHELRTPLHGMIGI
AEALISGANGPITSDHKYQLDIIATSGQRLARLVDNLLDYHKMRYGDLDIQCNAVDLSSSTRLVLELSNHLLGKKPLRII
NQISDNQFWVSADPQRLEQVLYNLIGNAIKYTSEGKIVISASQIDDQVRVQVVDTGQGIPAEQLEHIFEPLIQGTVDTNR
YRQGSGLGLSISRQLIELMHGTLYVSSQPLVGTTFSFTLPIASIKEIEQAKQTEQPHFQAPDIGEVELPDTNDLPENHDG
PLLLVADDEPVNLRIMDSFLRLEGYRIRTVADGNDVLKAVEKEKPELLLLDIMMPGMSGYQVCEKLRETYSITDLPIIML
TALNQTEDRLRGFAAGANDYLSKPFNKKELAARIHAHLAASQAEQKRLENLELQNEIKQRNIVEADLLETQERLLEQLDS
SPEAIICLKENNKILFANQAASRLFKRTQEQLKRSSAEELFSHKYLNITQEHYCGEVDIFVGDSRLHLSADILRLPKGSG
MQAIYILNVGGAQSAQRILNLETAVDALSSYAFSGDKERLQQLKELGGEFTRIADKAEGDNQSKQELMRAVLVDAMTSAL
NYWEKAPGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRVETVPKTPRWRTVLNSLDYILEHHNDPGTERIHLEAVRNK
LQKLIASM

Nucleotide

• Length: 3387 bp

>NTDB_id=426149 G5S32_RS02590 WP_165310348.1 565152..568538(-) (chiS) [Vibrio ziniensis strain ZWAL4003]
ATGTTTAGGTTTTATCGCAGGCAAAAGTTTAAACGCTTACAAAACACCTTAATGCTAGCCTTTCTGGTGCTGAGCATTAC
CCCTCTAACCATTACCGCTATCTTCTTCCTGAAGTCTCATATTGATGATCTTCAAGAACAAAGCACTTCCCACCTTCTGT
CTGTTCGAGATACAAAACAGCAGCAAGTTATCGACTATCTCAATGCTAAAGAATCAGAAGTAATGGGATTTGTTCGTTCA
GAGCTAGCGTATGCCAGTGGCGGCAGATTTTACGGCTTAGTGAACGCATTTTCTCGCTTAGGTGAAGATATAGAACAAGC
GCGGGAAAACGCACAACAGCGATATATTCTTGGATCGGGCGATCAAGTGAAAACTTCCGTTCTTCCTCAATCTAGCAGTT
ATGTTGGTAGTGAACGTTACCGCCTTTTGCATAAACGTTATCACTGGGCGTATATGGAGCTACTTAAACGCTCTGATTTT
GATGATATTTTACTAGTCGACTTAAACGGGAACGTCACTTACTCAATCAACAAGAATGAGGAGTACGGCACCAACCTGTT
TTCTGGAAAGTTCAAGGATGCCAATCTTGGGCAAACCTTTCAATTATTAGAGAAAACCGTTTCTGAGCACAGAAAAACCG
ACGAAGATTATACCCCTGTCATTCTTTCAGACTTCATTGAGGAAAATGGGCAACAATACGCTTGGTTTGGCGCACCTATC
ATCCAACAAGGCTATTTGCACAGTTACGCCATGTTCCGCTTGCCAAATAAAGGCATCACCAAACTCATCGCCGACAGTAG
CAGTTCTGCGATGCAAACACTGCTTGTAGGACAAGATCATCGCTCGCTAACGCTTTCGTACTTACAAGACGAGATTGATA
AAAGCGGTGAAGTCATCAATTTAGCGCTATCAGGCAAAATTGATGTGGGCACTTATACCGATACACTCGGTGAGAAAAAT
ATTGCCGCTTACGCACCAATCAATCTTAAAAATACACACGGGGCCATCATCGTTGAGCTGCCAGAGAAAGAAGCCTTTGC
ACGCGTTAACCAGTTAGAAAAGCTATTCATATTTGCCATGCTGACAGCCATCGTATTGGTGGTCATCGCATCTCATATGC
TTTCAAATTTCATTACAGCTCCGTTATTAAGACTCACTTGGGCTGCTGAGCGTGCCTCAGCCGGCGATCTCGATGAAAGC
ATGATTAACACTGAGCGCAAAGACGAGATTGGTCGACTTGCTGTCAGTTTCGAGCGTATGCAGCGCTCCATCCGTGAAAA
AATCCAGCTCATCAAATCGCAAAACAGTGAACTGGAAAAAAACATCCAAATTATTCGTAAACAAAACGAAGAATTGCAGC
TAGCCAACAAACTCAAAGACGAGTTTCTAGCAACAACCTCTCACGAACTGAGAACCCCATTACACGGCATGATCGGTATT
GCTGAAGCGCTGATTTCAGGTGCAAACGGCCCTATTACTTCTGACCACAAATACCAGTTAGATATTATCGCCACTAGCGG
TCAACGCCTTGCTCGCCTAGTGGACAATTTACTCGATTATCACAAGATGCGTTATGGTGATTTGGATATTCAGTGCAATG
CAGTGGATCTTTCGAGTTCGACACGACTAGTGCTAGAGCTCTCCAACCATCTGCTTGGTAAAAAGCCGCTCAGGATCATC
AACCAGATATCCGACAATCAGTTCTGGGTTTCTGCCGATCCACAACGTCTAGAGCAAGTGTTGTATAACCTTATCGGTAA
TGCGATCAAATATACATCAGAAGGTAAGATCGTCATTTCCGCTTCACAGATCGATGACCAAGTTCGAGTTCAAGTTGTAG
ATACTGGTCAAGGGATTCCTGCGGAGCAACTAGAGCATATTTTTGAACCGCTTATTCAAGGAACAGTAGATACAAATCGC
TACCGTCAAGGTTCGGGACTTGGTTTGTCCATTAGCCGTCAGTTGATAGAATTGATGCATGGCACCCTTTATGTGAGTAG
CCAGCCACTGGTTGGTACCACCTTTAGCTTCACATTACCTATTGCTTCAATTAAAGAGATTGAGCAAGCCAAACAGACCG
AACAGCCCCACTTTCAGGCTCCGGACATTGGCGAAGTTGAACTTCCAGATACGAATGATTTACCGGAAAACCACGATGGT
CCGTTGTTATTGGTCGCAGATGATGAACCTGTGAACCTTCGTATTATGGATAGCTTCTTAAGGTTAGAAGGTTATCGTAT
TCGGACAGTCGCTGACGGTAATGATGTACTCAAAGCGGTTGAAAAAGAGAAACCCGAGCTGTTACTACTCGATATCATGA
TGCCAGGTATGAGTGGCTATCAAGTTTGTGAAAAATTAAGAGAAACATACAGTATTACAGATTTACCTATCATCATGCTT
ACTGCTTTAAATCAAACAGAAGACCGTTTGAGAGGATTTGCAGCAGGTGCGAATGACTACTTGTCGAAACCTTTCAATAA
AAAGGAACTGGCAGCACGTATCCATGCTCATCTAGCCGCGAGTCAAGCAGAGCAAAAACGATTGGAAAACCTTGAACTGC
AAAATGAGATCAAACAGAGAAATATCGTTGAAGCTGATTTATTAGAGACACAAGAAAGACTTTTAGAGCAACTTGATTCT
TCTCCAGAAGCTATTATTTGCCTAAAAGAAAACAACAAGATTCTGTTTGCAAACCAAGCAGCCTCTAGACTCTTTAAACG
CACCCAAGAGCAACTTAAACGCTCCAGTGCTGAAGAGCTGTTTTCTCATAAATATCTTAACATTACTCAAGAACATTATT
GTGGTGAGGTGGATATTTTTGTTGGTGATTCACGACTCCACTTATCCGCAGATATTCTCAGACTCCCTAAAGGTTCTGGT
ATGCAGGCTATTTATATATTAAACGTCGGTGGTGCTCAAAGTGCGCAAAGGATACTTAATTTGGAAACAGCAGTGGACGC
ATTATCGAGCTACGCATTCAGTGGGGATAAAGAGAGGCTGCAGCAACTAAAAGAACTCGGGGGTGAATTTACCCGCATTG
CAGATAAAGCGGAAGGAGACAACCAATCGAAGCAAGAGCTCATGCGAGCAGTGCTTGTCGATGCGATGACCAGTGCACTC
AACTATTGGGAGAAAGCTCCGGGTCAATCTAAGTTCACCTTCGCTGAACAAAGTGGTCTATGGCGTGTCTATCTCGACCG
AAGCACATTGCAAACCCGAACACTTGATAAGTACCTGCGAGTAGAAACAGTACCGAAAACGCCGCGCTGGCGTACTGTGC
TGAACTCTCTCGATTATATCCTTGAACATCATAATGATCCGGGAACAGAGCGCATTCACTTGGAGGCGGTGCGTAATAAG
CTTCAGAAGCTGATAGCCTCTATGTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-681)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Response regulator receiver domain (Response_reg) (724-834)

• PAS fold (PAS) (874-925)

• HAMP domain (HAMP) (374-426)

3D structure

• AlphaFold DB: A0A6G7CFX2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	78.457	100	0.785