Detailed information NTG0426141

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: G5S32_RS00965
• Genome accession: NZ_CP049331
• Coordinates: 218410..219417 (+)
• Length: 335 a.a.
• NCBI ID: WP_165310070.1
• Uniprot ID: A0A6G7CEY2
• Organism: Vibrio ziniensis strain ZWAL4003
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 213410..224417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5S32_RS00945 (G5S32_00945)	metJ	213514..213831 (+)	318	WP_042484962.1	met regulon transcriptional regulator MetJ	-
G5S32_RS00950 (G5S32_00950)	-	213966..215243 (-)	1278	WP_165310067.1	malic enzyme-like NAD(P)-binding protein	-
G5S32_RS00955 (G5S32_00955)	rpmE	215434..215652 (-)	219	WP_165310068.1	50S ribosomal protein L31	-
G5S32_RS00960 (G5S32_00960)	priA	215900..218101 (+)	2202	WP_165310069.1	primosomal protein N'	-
G5S32_RS00965 (G5S32_00965)	cytR	218410..219417 (+)	1008	WP_165310070.1	DNA-binding transcriptional regulator CytR	Regulator
G5S32_RS00970 (G5S32_00970)	-	219530..220078 (+)	549	WP_165310071.1	SPOR domain-containing protein	-
G5S32_RS00975 (G5S32_00975)	hslV	220247..220801 (+)	555	WP_102941223.1	ATP-dependent protease subunit HslV	-
G5S32_RS00980 (G5S32_00980)	hslU	220833..222164 (+)	1332	WP_165310072.1	HslU--HslV peptidase ATPase subunit	-
G5S32_RS00985 (G5S32_00985)	-	222287..223204 (+)	918	WP_165310073.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
G5S32_RS00990 (G5S32_00990)	rraA	223280..223810 (+)	531	WP_165310074.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36991.47 Da
• Isoelectric Point: 5.4331

>NTDB_id=426141 G5S32_RS00965 WP_165310070.1 218410..219417(+) (cytR) [Vibrio ziniensis strain ZWAL4003]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRVAQISGPESATLCQFRHQGYQQALRRAGITMNPDYVIYGDFTFESGVSAVRELLSLPDVPTA
IFCHNDIMAIGAMQEAKRLGLRIPRDLSIVGFDDIQFSQYCDPPLTTISQPRYEIGRQAMLMMLELLRGLDVQAGSRLLD
TSLVVRESAAPPRSH

Nucleotide

• Length: 1008 bp

>NTDB_id=426141 G5S32_RS00965 WP_165310070.1 218410..219417(+) (cytR) [Vibrio ziniensis strain ZWAL4003]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGCGTATCGACCGCGACAGTGTCGCGGGCTCTGATGAATCCTGAGAA
AGTATCGTCTTCAACTCGCAAGCGCGTAGAAGAAGCGGTTTTAGAAGCTGGCTATTCACCGAATTCTCTCGCGAGAAATC
TGCGTCGAAATGAGTCTAAAACGATCGTGGCGATTGTCCCTGATATTTGTGACCCTTATTTCACCGAAATTATTCGTGGT
ATCGAAGACGCGGCGATGGAGCATGGATACCTTGTTTTACTGGGTGACAGTGGTCAGCAAAAGAAACGAGAAAGTTCATT
CGTTAATTTGGTTTTTACCAAGCAAGCCGATGGTATGTTGTTGTTAGGTACTGACTTGCCGTTTGATGTGAGTAAACCGG
AACAGAAGAACCTTCCGCCAATGGTTATGGCGTGCGAGTTCGCACCAGAACTGGAGCTACCGACGGTTCATATCGATAAC
CTGACCTCTGCATTTGAAGCTGTGAACTATCTAACTCAGTTGGGTCACAAGCGTGTTGCTCAAATTTCTGGTCCAGAAAG
CGCGACACTTTGCCAGTTCCGCCACCAAGGGTATCAGCAGGCACTGCGTAGAGCTGGCATTACCATGAATCCCGACTATG
TGATTTATGGTGATTTCACGTTTGAATCGGGTGTCAGTGCCGTTCGTGAGTTACTTTCTCTGCCCGACGTACCAACAGCG
ATTTTTTGCCACAATGATATTATGGCGATAGGTGCGATGCAGGAAGCAAAACGTTTGGGGCTTCGTATTCCACGAGATCT
TTCCATTGTGGGGTTTGATGACATCCAGTTTTCACAATACTGCGATCCACCATTAACGACAATTTCTCAGCCTCGTTATG
AGATTGGGCGTCAAGCCATGCTGATGATGTTAGAGCTACTGCGTGGTTTAGATGTTCAAGCGGGTTCACGTTTATTGGAT
ACGAGTTTAGTCGTCCGTGAAAGTGCTGCTCCACCTCGCTCTCACTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

3D structure

• AlphaFold DB: A0A6G7CEY2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	91.566	99.104	0.907
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869