Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   G6536_RS08265 Genome accession   NZ_CP049330
Coordinates   1610831..1611412 (+) Length   193 a.a.
NCBI ID   WP_207185305.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CP6     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1605831..1616412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6536_RS08235 (G6536_08350) - 1606134..1606589 (+) 456 WP_009328585.1 flavodoxin -
  G6536_RS08240 (G6536_08355) dapD 1606695..1607405 (+) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  G6536_RS08245 (G6536_08360) - 1607474..1608598 (+) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  G6536_RS08250 (G6536_08365) - 1608661..1608906 (+) 246 WP_003181323.1 YkuS family protein -
  G6536_RS08255 (G6536_08370) ahpA 1609201..1609743 (+) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  G6536_RS08260 (G6536_08375) - 1609825..1610283 (+) 459 WP_003181327.1 redoxin domain-containing protein -
  G6536_RS08265 (G6536_08380) rok 1610831..1611412 (+) 582 WP_207185305.1 transcriptional regulator Rok Regulator
  G6536_RS08270 (G6536_08385) - 1611558..1612514 (-) 957 WP_009328583.1 hypothetical protein -
  G6536_RS08275 (G6536_08390) - 1612667..1613254 (+) 588 WP_003181331.1 molybdenum cofactor guanylyltransferase -
  G6536_RS08280 (G6536_08395) - 1613360..1614373 (+) 1014 WP_011197943.1 molybdopterin-synthase adenylyltransferase MoeB -
  G6536_RS08285 (G6536_08400) glp 1614393..1615685 (+) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  G6536_RS08290 (G6536_08405) mobB 1615652..1616179 (+) 528 WP_003181336.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 22340.30 Da        Isoelectric Point: 10.1114

>NTDB_id=426090 G6536_RS08265 WP_207185305.1 1610831..1611412(+) (rok) [Bacillus licheniformis strain CP6]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRRERKTESLPVLAELAAQEMKSYQQQQ
PQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTT
FMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 582 bp        

>NTDB_id=426090 G6536_RS08265 WP_207185305.1 1610831..1611412(+) (rok) [Bacillus licheniformis strain CP6]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCGGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGGAACGAC
AAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACATTAAAACGCC
ATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATGACAACC
TTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGAGATTTC
TACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

84.043

97.409

0.819