Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   G5C61_RS17585 Genome accession   NZ_CP049296
Coordinates   3292121..3292315 (+) Length   64 a.a.
NCBI ID   WP_164797075.1    Uniprot ID   -
Organism   Priestia megaterium strain S188     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3287121..3297315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G5C61_RS17560 galT 3287183..3288706 (+) 1524 WP_164797072.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  G5C61_RS17565 - 3288749..3289633 (-) 885 WP_164797073.1 NAD(P)-dependent oxidoreductase -
  G5C61_RS17570 - 3289838..3290026 (-) 189 WP_013055400.1 YjzD family protein -
  G5C61_RS17575 - 3290236..3290976 (+) 741 WP_013055401.1 hypothetical protein -
  G5C61_RS17580 - 3291159..3292043 (+) 885 WP_164797074.1 NAD(P)-dependent oxidoreductase -
  G5C61_RS17585 comZ 3292121..3292315 (+) 195 WP_164797075.1 ComZ family protein Regulator
  G5C61_RS17590 - 3292344..3292544 (-) 201 WP_164797076.1 hypothetical protein -
  G5C61_RS17595 - 3292801..3293739 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  G5C61_RS17600 fabF 3293779..3295020 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  G5C61_RS17605 - 3295126..3295899 (+) 774 WP_164797077.1 DUF2268 domain-containing protein -
  G5C61_RS17610 - 3296126..3297148 (+) 1023 WP_164797078.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7343.37 Da        Isoelectric Point: 3.9327

>NTDB_id=425965 G5C61_RS17585 WP_164797075.1 3292121..3292315(+) (comZ) [Priestia megaterium strain S188]
MDEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=425965 G5C61_RS17585 WP_164797075.1 3292121..3292315(+) (comZ) [Priestia megaterium strain S188]
ATGGATGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCGATGGAACACGTGCAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563