Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   G5C61_RS03870 Genome accession   NZ_CP049296
Coordinates   719355..720305 (-) Length   316 a.a.
NCBI ID   WP_164795751.1    Uniprot ID   -
Organism   Priestia megaterium strain S188     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 714355..725305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G5C61_RS03850 - 715374..716216 (-) 843 WP_057244402.1 manganese catalase family protein -
  G5C61_RS03855 - 716683..717639 (-) 957 WP_164795747.1 siderophore ABC transporter substrate-binding protein -
  G5C61_RS03860 - 717663..718421 (-) 759 WP_164795749.1 ABC transporter ATP-binding protein -
  G5C61_RS03865 - 718415..719362 (-) 948 WP_057244400.1 iron chelate uptake ABC transporter family permease subunit -
  G5C61_RS03870 ceuB 719355..720305 (-) 951 WP_164795751.1 ABC transporter permease Machinery gene
  G5C61_RS03875 - 720886..721692 (-) 807 WP_098599137.1 cell wall hydrolase -
  G5C61_RS03880 - 722055..722309 (+) 255 WP_013057893.1 hypothetical protein -
  G5C61_RS03885 - 722391..722555 (-) 165 WP_164795753.1 hypothetical protein -
  G5C61_RS03890 - 722893..724071 (+) 1179 WP_164795754.1 styrene monooxygenase/indole monooxygenase family protein -
  G5C61_RS03895 - 724527..724856 (-) 330 WP_057244395.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34955.21 Da        Isoelectric Point: 9.8083

>NTDB_id=425924 G5C61_RS03870 WP_164795751.1 719355..720305(-) (ceuB) [Priestia megaterium strain S188]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFPLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMKILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVNYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=425924 G5C61_RS03870 WP_164795751.1 719355..720305(-) (ceuB) [Priestia megaterium strain S188]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCCTTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAAAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTGGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCGTGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCCTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCCGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAACTACAAACAAATCGTAAATATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
GGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5