Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   GYO_RS30050 Genome accession   NC_016047
Coordinates   1597157..1597741 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus spizizenii TU-B-10     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1592157..1602741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GYO_RS30015 (GYO_1753) dapD 1592342..1593052 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  GYO_RS30020 (GYO_1754) - 1593122..1594246 (+) 1125 WP_014113624.1 N-acetyldiaminopimelate deacetylase -
  GYO_RS30025 (GYO_1755) - 1594308..1594553 (+) 246 WP_003218684.1 YkuS family protein -
  GYO_RS30030 (GYO_1756) mscT 1594589..1595392 (-) 804 WP_014113625.1 small-conductance mechanosensitive channel protein MscT -
  GYO_RS30040 (GYO_1757) ahpA 1595636..1596178 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  GYO_RS30045 (GYO_1758) ykuV 1596248..1596706 (+) 459 WP_014113626.1 thiol-disulfide oxidoreductase YkuV -
  GYO_RS30050 (GYO_1760) rok 1597157..1597741 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  GYO_RS30055 (GYO_1761) - 1597782..1598747 (-) 966 WP_014113629.1 hypothetical protein -
  GYO_RS30060 (GYO_1762) - 1598883..1599482 (+) 600 WP_014113630.1 molybdenum cofactor guanylyltransferase -
  GYO_RS30065 (GYO_1763) - 1599533..1600552 (+) 1020 WP_014113631.1 MoeB/ThiF family adenylyltransferase -
  GYO_RS30070 (GYO_1764) glp 1600570..1601862 (+) 1293 WP_014113632.1 gephyrin-like molybdotransferase Glp -
  GYO_RS30075 (GYO_1765) mobB 1601823..1602356 (+) 534 WP_014113633.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=42579 GYO_RS30050 WP_014113628.1 1597157..1597741(+) (rok) [Bacillus spizizenii TU-B-10]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=42579 GYO_RS30050 WP_014113628.1 1597157..1597741(+) (rok) [Bacillus spizizenii TU-B-10]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTAGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGGACAGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAATGCGG
CGATTAAGAGCTCTGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCGTATCGCGGTCAGTACATTTTAGAAGGCGAAATTGAATCAGCTGA
ATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment