Detailed information NTG0425671

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MFABIIPG_RS09570
• Genome accession: NZ_CP049240
• Coordinates: 2055109..2055810 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain Ax270
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2050109..2060810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MFABIIPG_RS09540 (MFABIIPG_01901)	-	2050416..2050859 (-)	444	WP_001246675.1	SRPBCC family protein	-
MFABIIPG_RS09545 (MFABIIPG_01902)	tadA	2050929..2051432 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
MFABIIPG_RS09550 (MFABIIPG_01903)	-	2051439..2052563 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MFABIIPG_RS09555 (MFABIIPG_01904)	ung	2052560..2053273 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
MFABIIPG_RS09560 (MFABIIPG_01905)	-	2053324..2053920 (-)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
MFABIIPG_RS09565 (MFABIIPG_01906)	gspK	2054150..2055109 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
MFABIIPG_RS09570 (MFABIIPG_01907)	xcpW	2055109..2055810 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MFABIIPG_RS09575 (MFABIIPG_01908)	xcpV	2055810..2056190 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
MFABIIPG_RS09580 (MFABIIPG_01909)	-	2056180..2056734 (-)	555	WP_000841373.1	type II secretion system protein	-
MFABIIPG_RS09585 (MFABIIPG_01910)	-	2056744..2057352 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MFABIIPG_RS09590 (MFABIIPG_01911)	-	2057390..2058163 (-)	774	WP_000497300.1	TatD family hydrolase	-
MFABIIPG_RS09595 (MFABIIPG_01912)	-	2058181..2058522 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
MFABIIPG_RS09600 (MFABIIPG_01913)	-	2058534..2059514 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
MFABIIPG_RS09605 (MFABIIPG_01914)	kdsB	2059526..2060287 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=425671 MFABIIPG_RS09570 WP_000594579.1 2055109..2055810(-) (xcpW) [Acinetobacter baumannii strain Ax270]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=425671 MFABIIPG_RS09570 WP_000594579.1 2055109..2055810(-) (xcpW) [Acinetobacter baumannii strain Ax270]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983