Detailed information NTG0042564

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: SAEMRSA15_RS03670
• Genome accession: NC_017763
• Coordinates: 775790..776872 (+)
• Length: 360 a.a.
• NCBI ID: WP_001670292.1
• Uniprot ID: -
• Organism: Staphylococcus aureus subsp. aureus HO 5096 0412
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 770790..781872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAEMRSA15_RS03650 (SAEMRSA15_06720)	gdpS	771168..772238 (-)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-
SAEMRSA15_RS03655 (SAEMRSA15_06730)	-	772556..773611 (+)	1056	WP_000258149.1	glycosyltransferase family 4 protein	-
SAEMRSA15_RS03660 (SAEMRSA15_06740)	-	773775..774416 (-)	642	WP_000192942.1	YigZ family protein	-
SAEMRSA15_RS03665 (SAEMRSA15_06750)	fakB1	774560..775426 (+)	867	WP_000686344.1	fatty acid kinase binding subunit FakB1	-
SAEMRSA15_RS03670 (SAEMRSA15_06760)	comFA	775790..776872 (+)	1083	WP_001670292.1	DEAD/DEAH box helicase	Machinery gene
SAEMRSA15_RS03675 (SAEMRSA15_06770)	-	776865..777539 (+)	675	WP_001057974.1	ComF family protein	-
SAEMRSA15_RS03680 (SAEMRSA15_06780)	hpf	777600..778172 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
SAEMRSA15_RS03685 (SAEMRSA15_06790)	secA	778587..781118 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
SAEMRSA15_RS03690	-	781160..781258 (+)	99	WP_031789464.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42010.51 Da
• Isoelectric Point: 9.7563

>NTDB_id=42564 SAEMRSA15_RS03670 WP_001670292.1 775790..776872(+) (comFA) [Staphylococcus aureus subsp. aureus HO 5096 0412]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENVIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINKQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGQFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=42564 SAEMRSA15_RS03670 WP_001670292.1 775790..776872(+) (comFA) [Staphylococcus aureus subsp. aureus HO 5096 0412]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCCTATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATGTAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTCAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAAACAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACAATTTGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTGGTTGTTATCGATGCGCATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (214-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369