Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IF782_RS00515 Genome accession   NZ_CP062312
Coordinates   92062..92880 (+) Length   272 a.a.
NCBI ID   WP_239794330.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_OP_163     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 87062..97880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF782_RS00490 (IF782_00490) - 87681..88211 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  IF782_RS00495 (IF782_00495) yfkAB 88471..89622 (-) 1152 WP_001089619.1 radical SAM/CxCxxxxC motif protein YfkAB -
  IF782_RS00500 (IF782_00500) - 89846..90007 (+) 162 WP_001005407.1 SE1561 family protein -
  IF782_RS00505 (IF782_00505) - 90138..90653 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  IF782_RS00510 (IF782_00510) sgtB 90992..91801 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  IF782_RS00515 (IF782_00515) recX 92062..92880 (+) 819 WP_239794330.1 recombination regulator RecX Regulator
  IF782_RS00520 (IF782_00520) - 92858..93172 (+) 315 WP_000435806.1 YfhH family protein -
  IF782_RS00525 (IF782_00525) - 93187..94704 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  IF782_RS00530 (IF782_00530) - 94713..95549 (+) 837 WP_000886456.1 hypothetical protein -
  IF782_RS00535 (IF782_00535) - 95810..96787 (-) 978 WP_000379098.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=425320 IF782_RS00515 WP_239794330.1 92062..92880(+) (recX) [Staphylococcus aureus strain NAS_OP_163]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGIMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=425320 IF782_RS00515 WP_239794330.1 92062..92880(+) (recX) [Staphylococcus aureus strain NAS_OP_163]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCATTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993