Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   G5C52_RS04805 Genome accession   NZ_CP049188
Coordinates   983204..983830 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain Y323     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 978204..988830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G5C52_RS04790 (G5C52_04780) helD 978443..980497 (-) 2055 WP_137048039.1 DNA helicase IV -
  G5C52_RS04795 (G5C52_04785) - 980620..981066 (+) 447 WP_003858149.1 YccF domain-containing protein -
  G5C52_RS04800 (G5C52_04790) yccS 981085..983247 (+) 2163 WP_164474258.1 YccS family putative transporter -
  G5C52_RS04805 (G5C52_04795) sxy/tfoX 983204..983830 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  G5C52_RS04810 (G5C52_04800) sulA 984048..984557 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  G5C52_RS04815 (G5C52_04805) ompA 984914..985966 (+) 1053 WP_120783682.1 porin OmpA -
  G5C52_RS04820 (G5C52_04810) matP 986032..986484 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  G5C52_RS04825 (G5C52_04815) - 986671..988431 (+) 1761 WP_032608967.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=425315 G5C52_RS04805 WP_023315767.1 983204..983830(-) (sxy/tfoX) [Enterobacter hormaechei strain Y323]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=425315 G5C52_RS04805 WP_023315767.1 983204..983830(-) (sxy/tfoX) [Enterobacter hormaechei strain Y323]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572