Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ST64987_RS09720 Genome accession   NZ_CP049053
Coordinates   1830069..1830836 (+) Length   255 a.a.
NCBI ID   WP_167401609.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST64987     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1825069..1835836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST64987_RS09705 (ST64987_1864) - 1827385..1828068 (-) 684 WP_011226711.1 YoaK family protein -
  ST64987_RS09710 (ST64987_1865) rlmH 1828084..1828563 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ST64987_RS09715 (ST64987_1866) htrA 1828768..1830003 (+) 1236 WP_014727759.1 S1C family serine protease Regulator
  ST64987_RS09720 (ST64987_1867) spo0J 1830069..1830836 (+) 768 WP_167401609.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29433.78 Da        Isoelectric Point: 9.6649

>NTDB_id=424506 ST64987_RS09720 WP_167401609.1 1830069..1830836(+) (spo0J) [Streptococcus thermophilus strain ST64987]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIVVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=424506 ST64987_RS09720 WP_167401609.1 1830069..1830836(+) (spo0J) [Streptococcus thermophilus strain ST64987]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTGTTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCCATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.471

100

0.565