Detailed information NTG0424249

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G5S46_RS10700
• Genome accession: NZ_CP048929
• Coordinates: 2051423..2052676 (+)
• Length: 417 a.a.
• NCBI ID: WP_047921365.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain CT213
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2046423..2057676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5S46_RS10680 (G5S46_10515)	-	2047171..2048172 (+)	1002	WP_010356039.1	thiamine ABC transporter substrate-binding protein	-
G5S46_RS10685 (G5S46_10520)	-	2048266..2049114 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
G5S46_RS10690 (G5S46_10525)	-	2049140..2049625 (+)	486	WP_003687001.1	CinA family protein	-
G5S46_RS10695 (G5S46_10530)	msrAB	2049709..2051277 (-)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
G5S46_RS10700 (G5S46_10535)	pilA	2051423..2052676 (+)	1254	WP_047921365.1	signal recognition particle-docking protein FtsY	Machinery gene
G5S46_RS10705 (G5S46_10540)	-	2052947..2053657 (-)	711	WP_373274872.1	opacity family porin	-
G5S46_RS12200 (G5S46_10545)	-	2054123..2054631 (-)	509	Protein_2085	pilin	-
G5S46_RS10720 (G5S46_10550)	-	2055000..2055143 (-)	144	WP_050303184.1	hypothetical protein	-
G5S46_RS10725 (G5S46_10555)	-	2055561..2055964 (-)	404	Protein_2087	pilin	-
G5S46_RS10730 (G5S46_10565)	lpxC	2056092..2057015 (-)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44431.78 Da
• Isoelectric Point: 4.7680

>NTDB_id=424249 G5S46_RS10700 WP_047921365.1 2051423..2052676(+) (pilA) [Neisseria gonorrhoeae strain CT213]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=424249 G5S46_RS10700 WP_047921365.1 2051423..2052676(+) (pilA) [Neisseria gonorrhoeae strain CT213]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGAACGCAACAATGTAACCGTCATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.281	100	0.993