Detailed information NTG0424067

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G4V51_RS10965
• Genome accession: NZ_CP048908
• Coordinates: 2097188..2098441 (+)
• Length: 417 a.a.
• NCBI ID: WP_047920694.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain SRRSH203
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2092188..2103441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4V51_RS10945	-	2092939..2093940 (+)	1002	WP_103195218.1	thiamine ABC transporter substrate-binding protein	-
G4V51_RS10950	-	2094034..2094882 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
G4V51_RS10955	-	2094908..2095390 (+)	483	WP_003694396.1	CinA family protein	-
G4V51_RS10960	msrAB	2095474..2097042 (-)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
G4V51_RS10965	pilA	2097188..2098441 (+)	1254	WP_047920694.1	signal recognition particle-docking protein FtsY	Machinery gene
G4V51_RS10970	-	2098527..2098697 (-)	171	WP_162855547.1	hypothetical protein	-
G4V51_RS10975	-	2098711..2099478 (-)	768	WP_143824040.1	opacity family porin	-
G4V51_RS12320	-	2100022..2100527 (-)	506	Protein_2127	pilin	-
G4V51_RS12495	-	2101343..2101461 (-)	119	Protein_2128	pilin	-
G4V51_RS10990	-	2101584..2101904 (-)	321	Protein_2129	pilin	-
G4V51_RS12325	-	2101965..2102348 (-)	384	Protein_2130	pilin	-
G4V51_RS10995	lpxC	2102493..2103416 (-)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44317.68 Da
• Isoelectric Point: 4.8618

>NTDB_id=424067 G4V51_RS10965 WP_047920694.1 2097188..2098441(+) (pilA) [Neisseria gonorrhoeae strain SRRSH203]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMDATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=424067 G4V51_RS10965 WP_047920694.1 2097188..2098441(+) (pilA) [Neisseria gonorrhoeae strain SRRSH203]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGATGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998