Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   XACM_RS14865 Genome accession   NC_016010
Coordinates   3484856..3485257 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas euvesicatoria pv. citrumelo F1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3479856..3490257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  XACM_RS14850 (XACM_3018) - 3481870..3483906 (-) 2037 WP_008575181.1 methyl-accepting chemotaxis protein -
  XACM_RS14855 (XACM_3019) - 3483946..3484476 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  XACM_RS14860 (XACM_3020) - 3484476..3484838 (-) 363 WP_005913708.1 response regulator -
  XACM_RS14865 (XACM_3021) pilG 3484856..3485257 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  XACM_RS14870 (XACM_3022) gshB 3485494..3486444 (+) 951 WP_008575184.1 glutathione synthase -
  XACM_RS14875 (XACM_3023) - 3486441..3487316 (+) 876 WP_014090780.1 energy transducer TonB -
  XACM_RS14880 (XACM_3024) - 3487658..3488215 (-) 558 Protein_2926 ADP-ribosylglycohydrolase family protein -
  XACM_RS14890 (XACM_3025) - 3488486..3488842 (-) 357 Protein_2927 ADP-ribosylglycohydrolase family protein -
  XACM_RS14895 (XACM_3026) tsaB 3488839..3489558 (-) 720 WP_008575199.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=42391 XACM_RS14865 WP_005913706.1 3484856..3485257(-) (pilG) [Xanthomonas euvesicatoria pv. citrumelo F1]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=42391 XACM_RS14865 WP_005913706.1 3484856..3485257(-) (pilG) [Xanthomonas euvesicatoria pv. citrumelo F1]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCTCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment