Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   G4P54_RS13260 Genome accession   NZ_CP048852
Coordinates   2481048..2481815 (-) Length   255 a.a.
NCBI ID   WP_024715016.1    Uniprot ID   A0A6H0WJI3
Organism   Bacillus tequilensis strain EA-CB0015     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 2476048..2486815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS13240 (G4P54_13195) - 2476221..2477033 (-) 813 WP_003226219.1 pyruvate, water dikinase regulatory protein -
  G4P54_RS13245 (G4P54_13200) ccpN 2477059..2477697 (-) 639 WP_003237058.1 transcriptional regulator CcpN -
  G4P54_RS13250 (G4P54_13205) glyS 2477831..2479870 (-) 2040 WP_167872897.1 glycine--tRNA ligase subunit beta -
  G4P54_RS13255 (G4P54_13210) glyQ 2479863..2480750 (-) 888 WP_024715017.1 glycine--tRNA ligase subunit alpha -
  G4P54_RS13260 (G4P54_13215) recO 2481048..2481815 (-) 768 WP_024715016.1 DNA repair protein RecO Machinery gene
  G4P54_RS13265 (G4P54_13220) - 2481852..2481995 (-) 144 WP_003230053.1 YqzL family protein -
  G4P54_RS13270 (G4P54_13225) era 2482139..2483044 (-) 906 WP_024715015.1 GTPase Era -
  G4P54_RS13275 (G4P54_13230) - 2483025..2483435 (-) 411 WP_167872898.1 cytidine deaminase -
  G4P54_RS13280 (G4P54_13235) - 2483554..2483925 (-) 372 WP_024715013.1 diacylglycerol kinase family protein -
  G4P54_RS13285 (G4P54_13240) ybeY 2483906..2484379 (-) 474 WP_024715012.1 rRNA maturation RNase YbeY -
  G4P54_RS13290 (G4P54_13245) pgpH 2484380..2486515 (-) 2136 WP_167872899.1 cyclic-di-AMP phosphodiesterase PgpH -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29283.01 Da        Isoelectric Point: 8.5606

>NTDB_id=423574 G4P54_RS13260 WP_024715016.1 2481048..2481815(-) (recO) [Bacillus tequilensis strain EA-CB0015]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTTGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDKGTEEKKPNPFLFEFILESFKQLNEGTDPDVILFIAQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRVPIKPQTARLLRLFYYFDLSRLGNVSLKQETKAELKQVIDLYYDEYSGLYLKSKRFL
DQMESMKHLLGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=423574 G4P54_RS13260 WP_024715016.1 2481048..2481815(-) (recO) [Bacillus tequilensis strain EA-CB0015]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTTACTTTACTGACAAG
AGAACACGGAAAAATAGGTGTGATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCATTCTTAATGCAAAAAACAACGGGTCTCGGAACGCTTCAGCAGGGTGAAATGATCCTCAGCATGAGAGGC
ATTAGGGAAGATTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGCTAGTCGATAAAGGCACAGAAGAAAAGAAGCC
AAACCCTTTTTTATTTGAATTTATTTTAGAGTCGTTTAAACAGCTGAATGAAGGAACAGATCCGGATGTCATCTTATTCA
TTGCTCAAATGAAAATGCTGGGTGTCATGGGGCTGTATCCTGAGCTGAATCACTGCGTGCATTGTAAAAGCCAGGACGGG
ACCTTTCATTTCTCTGTCCGCGATAACGGTTTTATTTGCCATCGCTGTTTTGAAAAAGATCCTTACAGGGTCCCGATTAA
GCCGCAAACGGCAAGGCTGTTGAGGCTGTTTTATTACTTCGATCTTTCGAGGCTGGGCAATGTGTCCTTAAAACAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTATGATGAATATTCAGGGTTATATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAGCATCTTTTAGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0WJI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

95.686

100

0.957