Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   G4P54_RS07600 Genome accession   NZ_CP048852
Coordinates   1423173..1423451 (+) Length   92 a.a.
NCBI ID   WP_024716212.1    Uniprot ID   A0A6H0WGI3
Organism   Bacillus tequilensis strain EA-CB0015     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1418173..1428451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS07580 (G4P54_07555) - 1419365..1420276 (+) 912 WP_167872266.1 ketopantoate reductase family protein -
  G4P54_RS07585 (G4P54_07560) - 1420305..1421537 (-) 1233 WP_167872267.1 aminopeptidase -
  G4P54_RS07590 (G4P54_07565) - 1421648..1421782 (-) 135 WP_032682172.1 protein YkpC -
  G4P54_RS07595 (G4P54_07570) mreBH 1421883..1422890 (-) 1008 WP_167872268.1 cell shape-determining protein MreBH -
  G4P54_RS07600 (G4P54_07575) abrB 1423173..1423451 (+) 279 WP_024716212.1 transcriptional regulator AbhA Regulator
  G4P54_RS07605 (G4P54_07580) kinC 1423642..1424940 (+) 1299 WP_024716211.1 two-component sensor histidine kinase KinC -
  G4P54_RS07610 (G4P54_07585) - 1424942..1425769 (+) 828 WP_024716210.1 gamma-glutamylcyclotransferase -
  G4P54_RS07615 (G4P54_07590) ktrC 1425841..1426506 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  G4P54_RS07620 (G4P54_07595) ade 1426664..1428397 (+) 1734 WP_167872269.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10252.08 Da        Isoelectric Point: 5.8742

>NTDB_id=423556 G4P54_RS07600 WP_024716212.1 1423173..1423451(+) (abrB) [Bacillus tequilensis strain EA-CB0015]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITPENKDYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=423556 G4P54_RS07600 WP_024716212.1 1423173..1423451(+) (abrB) [Bacillus tequilensis strain EA-CB0015]
ATGAAATCAATAGGTGTTGTGAGAAAAGTTGATGAATTAGGCCGTATTGTCATGCCGATAGAGTTAAGACGGGCGCTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGGGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATTACTCCAGAAAATAAAGATTACGGAAATGGTAAAATTACGCTGAGTCCTGAAGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0WGI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576