Detailed information NTG0423529

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IE382_RS16075
• Genome accession: NZ_CP061870
• Coordinates: 2953787..2954917 (-)
• Length: 376 a.a.
• NCBI ID: WP_144459354.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FX-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2948787..2959917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IE382_RS16050 (IE382_15990)	nucB	2949161..2949571 (-)	411	Protein_3121	sporulation-specific Dnase NucB	-
IE382_RS16055 (IE382_15995)	-	2949767..2950114 (+)	348	Protein_3122	sigma-70 family RNA polymerase sigma factor	-
IE382_RS16060 (IE382_16000)	spoIVCA	2950145..2951605 (-)	1461	WP_242304610.1	site-specific DNA recombinase SpoIVCA	-
IE382_RS16065	-	2951563..2951741 (-)	179	Protein_3124	hypothetical protein	-
IE382_RS16070 (IE382_16005)	-	2952159..2953370 (+)	1212	WP_242304373.1	hypothetical protein	-
IE382_RS23695	-	2953672..2953797 (-)	126	WP_260849814.1	hypothetical protein	-
IE382_RS16075 (IE382_16010)	rapC	2953787..2954917 (-)	1131	WP_144459354.1	aspartate phosphatase	Regulator
IE382_RS16080 (IE382_16015)	phrE	2955327..2955461 (+)	135	WP_144459352.1	phosphatase RapE inhibitor PhrE	-
IE382_RS16085 (IE382_16020)	-	2955568..2955730 (+)	163	Protein_3129	hypothetical protein	-
IE382_RS16090 (IE382_16025)	yqcG	2956100..2957695 (+)	1596	WP_144459350.1	LXG family T7SS effector endonuclease toxin YqcG	-
IE382_RS16095 (IE382_16030)	yqcF	2957710..2958288 (+)	579	WP_144459348.1	type VII secretion system immunity protein YqcF	-
IE382_RS16100 (IE382_16035)	-	2958400..2958690 (+)	291	WP_041850048.1	contact-dependent growth inhibition system immunity protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44257.65 Da
• Isoelectric Point: 6.5708

>NTDB_id=423529 IE382_RS16075 WP_144459354.1 2953787..2954917(-) (rapC) [Bacillus subtilis strain FX-1]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEINQMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIDE
LLEKIEASNKGITGLLSYYSLFFRGMYEFDKREYVKAIGFYREAEKHLTHVNDDIEKAEFHFKLAEAYYIMKQNHISMHH
VKQAMDIYNQYELYKVRKIQCHFVISGNYVDFKHFEKSLPHLEKALELSKQLERNERLLSSAYYNLGKNYADLGINDKAD
HFLNEAAKVSESAKLSNLPHSLFTYAKFLFKQGKTSEAIKMSKKGLSAAISQDDKLFVSLQKYLEALYINAIDQVGIKKT
IDYLERNKNYAYVEDIAIDTAEVFAKSKEFETSYVYHQKMLETQKQIQRGECLYEF

Nucleotide

• Length: 1131 bp

>NTDB_id=423529 IE382_RS16075 WP_144459354.1 2953787..2954917(-) (rapC) [Bacillus subtilis strain FX-1]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCTGAGGTGGAACAAGAGATCAATCAGATGGAGGAAGATGAGTATTTACTTATTTACTTCT
CTCTAATGAAATTCCGTCATCAGCTTATGTTAGATTATTTGGAACCAGTTACAACAAGAATCAGGCCAACTATTGATGAA
CTGCTTGAAAAAATAGAAGCATCCAATAAGGGGATAACTGGTCTGTTGTCTTACTACTCTCTGTTTTTTCGTGGAATGTA
TGAGTTTGATAAGAGGGAATATGTCAAAGCAATTGGTTTTTATCGAGAAGCAGAAAAACACCTTACTCATGTTAATGATG
ATATTGAGAAGGCGGAATTTCATTTTAAGTTGGCTGAAGCTTACTATATTATGAAGCAAAATCATATCTCGATGCACCAT
GTTAAACAAGCGATGGACATTTATAATCAATATGAACTTTATAAAGTGCGAAAAATACAATGTCATTTCGTGATATCTGG
AAATTACGTTGATTTTAAACATTTCGAGAAAAGCTTGCCGCATCTTGAAAAAGCCTTAGAGTTGTCCAAACAATTAGAGC
GCAATGAAAGGCTACTTAGCTCGGCTTACTACAATCTCGGAAAGAATTACGCAGATTTAGGAATAAATGATAAAGCAGAT
CATTTCTTAAATGAGGCTGCCAAGGTATCAGAAAGTGCTAAGTTGAGCAATTTACCACATTCACTGTTTACATACGCTAA
ATTTCTTTTTAAGCAAGGGAAAACAAGTGAAGCAATAAAAATGAGTAAAAAGGGTTTATCTGCTGCAATATCCCAAGATG
ATAAACTTTTTGTGTCCCTGCAAAAGTATTTGGAAGCACTTTATATTAATGCAATAGATCAAGTGGGAATCAAAAAAACG
ATTGATTACTTAGAAAGAAATAAGAATTATGCGTATGTGGAAGATATCGCAATTGATACGGCTGAAGTTTTTGCAAAATC
AAAGGAATTTGAAACATCATATGTTTATCATCAAAAAATGCTTGAAACGCAAAAACAAATTCAGAGGGGAGAATGCCTGT
ATGAATTTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (221-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.947	100	0.449
rapF	Bacillus subtilis subsp. subtilis str. 168	41.579	100	0.42