Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   G4P54_RS00245 Genome accession   NZ_CP048852
Coordinates   44524..44814 (-) Length   96 a.a.
NCBI ID   WP_003226760.1    Uniprot ID   A0A7G9PCZ4
Organism   Bacillus tequilensis strain EA-CB0015     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 39524..49814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS00205 (G4P54_00205) darA 39546..39875 (+) 330 WP_024713049.1 cyclic di-AMP receptor DarA -
  G4P54_RS00210 (G4P54_00210) - 39888..40328 (+) 441 WP_024713050.1 YaaR family protein -
  G4P54_RS00215 (G4P54_00215) holB 40340..41329 (+) 990 WP_024713051.1 DNA polymerase III subunit delta' -
  G4P54_RS00220 (G4P54_00220) ricT 41332..42159 (+) 828 WP_024713052.1 competence/sporulation regulator complex protein RicT -
  G4P54_RS00225 (G4P54_00225) yabA 42174..42533 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  G4P54_RS00230 (G4P54_00230) - 42592..43335 (+) 744 WP_024713053.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  G4P54_RS00235 (G4P54_00235) - 43322..43621 (+) 300 WP_024713054.1 GIY-YIG nuclease family protein -
  G4P54_RS00240 (G4P54_00240) rsmI 43596..44474 (+) 879 WP_024713055.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  G4P54_RS00245 (G4P54_00245) abrB 44524..44814 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  G4P54_RS00250 (G4P54_00250) metG 45310..47304 (+) 1995 WP_167871467.1 methionine--tRNA ligase -
  G4P54_RS00255 (G4P54_00255) - 47383..48150 (+) 768 WP_024713057.1 TatD family hydrolase -
  G4P54_RS00260 (G4P54_00260) - 48306..49619 (+) 1314 WP_167871468.1 ubiquitin-like domain-containing protein -

Sequence

Protein


Download         Length: 96 a.a.        Molecular weight: 10772.62 Da        Isoelectric Point: 6.3482

>NTDB_id=423528 G4P54_RS00245 WP_003226760.1 44524..44814(-) (abrB) [Bacillus tequilensis strain EA-CB0015]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK

Nucleotide


Download         Length: 291 bp        

>NTDB_id=423528 G4P54_RS00245 WP_003226760.1 44524..44814(-) (abrB) [Bacillus tequilensis strain EA-CB0015]
ATATTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(55-90)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(10-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9PCZ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

100

100

1